RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 METTL21CQ5VZV1 264 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 RNF219Q5W0B1 726 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 LRRC8EQ6NSJ5 796 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 FAM117BQ6P1L5 589 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 C16orf46Q6P387 395 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 CYB5D1Q6P9G0 228 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 Q6ZNB5 142 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 HTR3DQ70Z44 454 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 MTDHQ86UE4 582 aaKnown RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 CILP2Q8IUL8 1156 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 SLC22A9Q8IVM8 553 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 C10orf107Q8IVU9 208 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.23□□□□□ -0.77
SPARC-209ENST00000539687 GPATCH11Q8N954 259 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 TET1Q8NFU7 2136 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 OR7D4Q8NG98 312 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 OR6Y1Q8NGX8 325 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 OR6P1Q8NGX9 317 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 RFWD2Q8NHY2 731 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 TRIM43Q96BQ3 446 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 ATXN7L3BQ96GX2 97 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 NSL1Q96IY1 281 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 FAR2Q96K12 515 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 SCYL1Q96KG9 808 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 ZNF778Q96MU6 729 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 TRIB3Q96RU7 358 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 MECRQ9BV79 373 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 TDRD1Q9BXT4 1180 aaKnown RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 RNF38Q9H0F5 515 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 C12orf65Q9H3J6 166 aaKnown RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 ATXN3LQ9H3M9 355 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 IL21Q9HBE4 155 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 ASAH2Q9NR71 780 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 OXSMQ9NWU1 459 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 IL1RAPL1Q9NZN1 696 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 KIAA1522Q9P206 1035 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 VTI1BQ9UEU0 232 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 CPQQ9Y646 472 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 COMMD10Q9Y6G5 202 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 CENPFP49454 3210 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 MYO18AQ92614 2054 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 A0A0D9SEW6 157 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CCDC195A0A1B0GUA6 201 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 A0A1W2PQ67 120 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 C2orf78A6NCI8 922 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CBX4O00257 560 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 TGM5O43548 720 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 NPHS1O60500 1241 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CXCL14O95715 111 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 GLUD1P00367 558 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 GSRP00390 522 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CKMP06732 381 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 C8AP07357 584 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 SERPINA6P08185 405 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CNPP09543 421 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 LTA4HP09960 611 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 SLC35E2BP0CK96 405 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ATP5F1P24539 256 aaPredicted RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 GABRR2P28476 465 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 PTPN4P29074 926 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 PMLP29590 882 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 HOXA9P31269 272 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CA8P35219 290 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 PPARGP37231 505 aaPredicted RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 GRIA4P48058 902 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CSNK1DP48730 415 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 AQP5P55064 265 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 DNAJB13P59910 316 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 IRX4P78413 519 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 MPP1Q00013 466 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 FPGSQ05932 587 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 SF3A3Q12874 501 aaKnown RBP eCLIP10.22□□□□□ -0.77
SPARC-209ENST00000539687 PRKAA1Q13131 559 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CTBP1Q13363 440 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ITGA9Q13797 1035 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 SNCBQ16143 134 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ARHGAP15Q53QZ3 475 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 FSCBQ5H9T9 825 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 PPM1JQ5JR12 505 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CFAP157Q5JU67 520 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CXorf57Q6NSI4 855 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 LILRA6Q6PI73 481 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 PIWIL4Q7Z3Z4 852 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 TMC7Q7Z402 723 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 SLC41A1Q8IVJ1 513 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 HOMEZQ8IX15 550 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CARNMT1Q8N4J0 409 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 KIAA1958Q8N8K9 716 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 OR13J1Q8NGT2 312 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 MAGEC3Q8TD91 643 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 BLOC1S5Q8TDH9 187 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.22□□□□□ -0.77
SPARC-209ENST00000539687 RMDN1Q96DB5 314 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 RILPQ96NA2 401 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 TTC1Q99614 292 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 RAD9AQ99638 391 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms