RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 BOLA3Q53S33 107 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 PRRT3Q5FWE3 981 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 TMCO3Q6UWJ1 677 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 TP53INP2Q8IXH6 220 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 PAF1Q8N7H5 531 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 NIPA2Q8N8Q9 360 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 ECHDC3Q96DC8 303 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 ZNF599Q96NL3 588 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 PSKH2Q96QS6 385 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 IL12RB2Q99665 862 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 SLC13A1Q9BZW2 595 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 THAP2Q9H0W7 228 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 ANAPC7Q9UJX3 599 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 PNMA8BQ9ULN7 279 aaPredicted RBP22.37■■□□□ 1.17
SCARB1-206ENST00000539320 CAPN11Q9UMQ6 739 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 MUSKO15146 869 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 LZTS3O60299 673 aaPredicted RBP22.36■■□□□ 1.17
SCARB1-206ENST00000539320 LIG3P49916 1009 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 RENBPP51606 427 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 SEMG2Q02383 582 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 LBRQ14739 615 aaKnown RBP22.36■■□□□ 1.17
SCARB1-206ENST00000539320 CDCP2Q5VXM1 449 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 POLNQ7Z5Q5 900 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 IFI44Q8TCB0 444 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 CPLX3Q8WVH0 158 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 HNRNPLLQ8WVV9 542 aaKnown RBP22.36■■□□□ 1.17
SCARB1-206ENST00000539320 TEKT4Q8WW24 435 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 CSPG4P5Q96PW8 444 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 NUP85Q9BW27 656 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 ETNK2Q9NVF9 386 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 IP6K2Q9UHH9 426 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 SALL4Q9UJQ4 1053 aa22.36■■□□□ 1.17
SCARB1-206ENST00000539320 A0A087WV48 116 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 RARAP10276 462 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 AMPD1P23109 780 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 PEX5P50542 639 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 PPARDQ03181 441 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 NSUN2Q08J23 767 aaKnown RBP eCLIP22.35■■□□□ 1.17
SCARB1-206ENST00000539320 RALGDSQ12967 914 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 C1orf61Q13536 156 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 ZNF235Q14590 738 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 AGERQ15109 404 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 CDKN3Q16667 212 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 FAXCQ5TGI0 409 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 MAPK15Q8TD08 544 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 BTBD6Q96KE9 485 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 DEPDC7Q96QD5 511 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 PCDH18Q9HCL0 1135 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 IFNKQ9P0W0 207 aa22.35■■□□□ 1.17
SCARB1-206ENST00000539320 LUC7L2Q9Y383 392 aaKnown RBP22.35■■□□□ 1.17
SCARB1-206ENST00000539320 A0A087X0T9 212 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 CFAP69A5D8W1 941 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 TMEM110-MUSTN1A8MSY1 372 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 LMO7DNF2Z398 122 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 GCATO75600 419 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 GYPCP04921 128 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 PCCBP05166 539 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 CYP1A2P05177 515 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 FAM228BP0C875 321 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 HTR1BP28222 390 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 SERPINB6P35237 376 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 HSPA9P38646 679 aaKnown RBP22.34■■□□□ 1.17
SCARB1-206ENST00000539320 SCNN1BP51168 640 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 BLKP51451 505 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 SLC25A11Q02978 314 aaKnown RBP22.34■■□□□ 1.17
SCARB1-206ENST00000539320 SLC10A7Q0GE19 358 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 MTM1Q13496 603 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 NFATC4Q14934 902 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 NR0B2Q15466 257 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 TXNRD3NBQ6F5E7 133 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 GUSBP11Q6P575 273 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 ALKBH5Q6P6C2 394 aaKnown RBP22.34■■□□□ 1.17
SCARB1-206ENST00000539320 EFL1Q7Z2Z2 1120 aaKnown RBP22.34■■□□□ 1.17
SCARB1-206ENST00000539320 PDZD3Q86UT5 571 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 ATPAF2Q8N5M1 289 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 DCBLD2Q96PD2 775 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 PCDHB1Q9Y5F3 818 aa22.34■■□□□ 1.17
SCARB1-206ENST00000539320 RP1P56715 2156 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 CPED1A4D0V7 1026 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 TRAFD1O14545 582 aaPredicted RBP22.33■■□□□ 1.17
SCARB1-206ENST00000539320 TLX3O43711 291 aaPredicted RBP22.33■■□□□ 1.17
SCARB1-206ENST00000539320 BRINP1O60477 761 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 ANXA6P08133 673 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 ELFN1P0C7U0 828 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 TSHRP16473 764 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 PTMSP20962 102 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 ADKP55263 362 aaKnown RBP22.33■■□□□ 1.17
SCARB1-206ENST00000539320 NFKBIBQ15653 356 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 ALG11Q2TAA5 492 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 C6orf132Q5T0Z8 1188 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 DPPA4Q7L190 304 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 FSTL5Q8N475 847 aaPredicted RBP22.33■■□□□ 1.17
SCARB1-206ENST00000539320 ATL2Q8NHH9 583 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 GLMNQ92990 594 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 APOOQ9BUR5 198 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 BOCQ9BWV1 1114 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 ABCG4Q9H172 646 aa22.33■■□□□ 1.17
SCARB1-206ENST00000539320 PTPRQQ9UMZ3 2332 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.32■■□□□ 1.16
SCARB1-206ENST00000539320 EME2A4GXA9 379 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms