RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 DSG4Q86SJ6 1040 aa5.08□□□□□ -1.6
CCDC7-209ENST00000539197 HSPH1Q92598 858 aa5.08□□□□□ -1.6
CCDC7-209ENST00000539197 CSTL1Q9H114 145 aa5.08□□□□□ -1.6
CCDC7-209ENST00000539197 CDC14AQ9UNH5 594 aa5.08□□□□□ -1.6
CCDC7-209ENST00000539197 GREB1LQ9C091 1923 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 TYW5A2RUC4 315 aaKnown RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 IPO5O00410 1097 aaKnown RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 EBAG9O00559 213 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 SOCS6O14544 535 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 SETSIPP0DME0 302 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 SRCP12931 536 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 CST5P28325 142 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 ICA1Q05084 483 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 SLC20A2Q08357 652 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 SLC18A3Q16572 532 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 SOWAHAQ2M3V2 549 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 JMJD6Q6NYC1 403 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 KRTAP7-1Q8IUC3 87 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 ODF3L1Q8IXM7 274 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 CACNA2D3Q8IZS8 1091 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 DMBX1Q8NFW5 382 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 GRAPLQ8TC17 118 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 GDPD5Q8WTR4 605 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 ZNF501Q96CX3 271 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 TTC12Q9H892 705 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 DDX43Q9NXZ2 648 aaKnown RBP5.07□□□□□ -1.6
CCDC7-209ENST00000539197 CD207Q9UJ71 328 aa5.07□□□□□ -1.6
CCDC7-209ENST00000539197 A0A1B0GU03 582 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 A0A1W2PS18 150 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 STX16-NPEPL1H3BU86 382 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 STX16O14662 325 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 CSTBP04080 98 aaKnown RBP5.06□□□□□ -1.6
CCDC7-209ENST00000539197 RYKP34925 604 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 PMP22Q01453 160 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 ESCO2Q56NI9 601 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 CCNI2Q6ZMN8 369 aaPredicted RBP5.06□□□□□ -1.6
CCDC7-209ENST00000539197 MYPOPQ86VE0 399 aaPredicted RBP5.06□□□□□ -1.6
CCDC7-209ENST00000539197 PARP16Q8N5Y8 322 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 CLSTN3Q9BQT9 956 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 ABCF3Q9NUQ8 709 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 POU2F3Q9UKI9 436 aa5.06□□□□□ -1.6
CCDC7-209ENST00000539197 A0A1B0GVY2 172 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-209ENST00000539197 PRC1O43663 620 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
CCDC7-209ENST00000539197 RFPL2O75678 378 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 NDUFB4O95168 129 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 ZNF883P0CG24 379 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 HLA-DOBP13765 273 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 STX2P32856 288 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 RELQ04864 619 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-209ENST00000539197 ARHGEF6Q15052 776 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 MAP9Q49MG5 647 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 PPP6R3Q5H9R7 873 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-209ENST00000539197 CBWD5Q5RIA9 395 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 FAM83BQ5T0W9 1011 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 IRAK1BP1Q5VVH5 260 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 ZNF772Q68DY9 489 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-209ENST00000539197 WDR73Q6P4I2 378 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 IL20RBQ6UXL0 311 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 B3GNT6Q6ZMB0 384 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 MOB3CQ70IA8 216 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 METTL27Q8N6F8 245 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-209ENST00000539197 RND1Q92730 232 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 RBM4Q9BWF3 364 aaKnown RBP5.05□□□□□ -1.6
CCDC7-209ENST00000539197 SLC32A1Q9H598 525 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 C1RLQ9NZP8 487 aa5.05□□□□□ -1.6
CCDC7-209ENST00000539197 ABHD14A-ACY1A0A1B0GW23 586 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 HSPB2A8KAH6 182 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 KLRF2D3W0D1 207 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 IFIT2P09913 472 aaKnown RBP5.04□□□□□ -1.6
CCDC7-209ENST00000539197 ITGAXP20702 1163 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 KRTAP5-9P26371 169 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 TBX4P57082 545 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 HSPB2Q16082 182 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 PRSS45Q7RTY3 260 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 BARHL1Q9BZE3 327 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 LMAN2LQ9H0V9 348 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 TAAR2Q9P1P5 351 aa5.04□□□□□ -1.6
CCDC7-209ENST00000539197 IGKV3D-15A0A087WSY6 115 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 CBY3A6NI87 242 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 MTA2O94776 668 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 ZNF8P17098 575 aaPredicted RBP5.03□□□□□ -1.6
CCDC7-209ENST00000539197 HNRNPH1P31943 449 aaKnown RBP5.03□□□□□ -1.6
CCDC7-209ENST00000539197 TOGARAM2Q6ZUX3 1019 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 NFE4Q86UQ8 179 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 BBS10Q8TAM1 723 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 ALG14Q96F25 216 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 PCGF6Q9BYE7 350 aa5.03□□□□□ -1.6
CCDC7-209ENST00000539197 COL2A1P02458 1487 aaPredicted RBP5.02□□□□□ -1.61
CCDC7-209ENST00000539197 IGKV3D-20A0A0C4DH25 116 aa5.02□□□□□ -1.61
CCDC7-209ENST00000539197 LILRA5A6NI73 299 aa5.02□□□□□ -1.61
CCDC7-209ENST00000539197 CAPN9O14815 690 aa5.02□□□□□ -1.61
CCDC7-209ENST00000539197 PLRG1O43660 514 aaKnown RBP5.02□□□□□ -1.61
CCDC7-209ENST00000539197 PRSS1P07477 247 aa5.02□□□□□ -1.61
CCDC7-209ENST00000539197 CDH1P12830 882 aa5.02□□□□□ -1.61
CCDC7-209ENST00000539197 VEGFAP15692 232 aaPredicted RBP5.02□□□□□ -1.61
CCDC7-209ENST00000539197 GPTP24298 496 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms