RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KNSTRNQ9Y448 316 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 INSL6Q9Y581 213 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ZMYM2Q9UBW7 1377 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LTBP4Q8N2S1 1624 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 hCG_1807616A0A1W2PRN6 198 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 URADA6NGE7 173 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LRRC53A6NM62 1247 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PER2O15055 1255 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ADAM20O43506 726 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LIASO43766 372 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TACC1O75410 805 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 C1QL1O75973 258 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SERPINF2P08697 491 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TMIGD3P0DMS9 266 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ITGAMP11215 1152 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 UBL4AP11441 157 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PKMP14618 531 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 MYOGP15173 224 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF20P17024 532 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CYP11B2P19099 503 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 DGKAP23743 735 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 IGHMBP2P38935 993 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GSTM5P46439 218 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TERF1P54274 439 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ROR1Q01973 937 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FPGSQ05932 587 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RUNX2Q13950 521 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KRT81Q14533 505 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 IL13RA2Q14627 380 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KPNB1Q14974 876 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PKN2Q16513 984 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 UGCGQ16739 394 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 COL28A1Q2UY09 1125 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CERKLQ49MI3 558 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 USP39Q53GS9 565 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ANKRD45Q5TZF3 282 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FAM171A1Q5VUB5 890 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KIAA0930Q6ICG6 404 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FAAP20Q6NZ36 180 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RPUSD3Q6P087 351 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ERN2Q76MJ5 926 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 G2E3Q7L622 706 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SZRD1Q7Z422 152 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SPRED1Q7Z699 444 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 AMIGO2Q86SJ2 522 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ADGRG6Q86SQ4 1221 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GPSM1Q86YR5 675 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RFX6Q8HWS3 928 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 Q8N1X5 172 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 XXYLT1Q8NBI6 393 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ZFAND2BQ8WV99 257 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CAVIN3Q969G5 261 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 DAZAP1Q96EP5 407 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PTCD3Q96EY7 689 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SLC41A2Q96JW4 573 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ADPGKQ9BRR6 497 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 BTBD10Q9BSF8 475 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TUBB6Q9BUF5 446 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PANK2Q9BZ23 570 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KCNN2Q9H2S1 579 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 Q9N2J8 555 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ZCCHC17Q9NP64 241 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SETD4Q9NVD3 440 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM248Q9NWD8 314 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 WDR35Q9P2L0 1181 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KLQ9UEF7 1012 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FBXW11Q9UKB1 542 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CA5BQ9Y2D0 317 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 A0A0U1RQJ8 604 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 A0A1W2PS18 150 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MANSC4A6NHS7 340 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CBY3A6NI87 242 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SH2D7A6NKC9 451 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 INO80B-WBP1J3KQ70 363 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TNPO2O14787 897 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PSMA7O14818 248 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PAPSS1O43252 624 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ENTPD3O75355 529 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MT-CO3P00414 261 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TFP02787 698 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 EIF2S1P05198 315 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ALDOCP09972 364 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SAGP10523 405 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF37AP17032 561 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CALRP27797 417 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 HNF1BP35680 557 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 RPL21P46778 160 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CLCN3P51790 818 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 INHBCP55103 352 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TMPRSS3P57727 454 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 YPEL5P62699 121 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 NUCB1Q02818 461 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 YWHAHQ04917 246 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CHAF1BQ13112 559 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PTPRCAPQ14761 206 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SYCE2Q6PIF2 218 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SUSD1Q6UWL2 747 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 QSOX2Q6ZRP7 698 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ATG9AQ7Z3C6 839 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 DNAJB7Q7Z6W7 309 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms