RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FAIM2Q9BWQ8 316 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 RNF39Q9H2S5 420 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CCDC134Q9H6E4 229 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KLC4Q9NSK0 619 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 VTI1BQ9UEU0 232 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SLC9A8Q9Y2E8 581 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 HBS1LQ9Y450 684 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 OR2AG2A6NM03 316 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 H3BM21 787 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CCNDBP1O95273 360 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ITGAVP06756 1048 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TFEBP19484 476 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 AKT2P31751 481 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 USP4Q13107 963 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TEAD2Q15562 447 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KLHL35Q6PF15 583 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 OR4K2Q8NGD2 314 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ZNF398Q8TD17 642 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 POF1BQ8WVV4 589 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PRCCQ92733 491 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 CSPG4P5Q96PW8 444 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 HNRNPABQ99729 332 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 TMEM175Q9BSA9 504 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GLOD4Q9HC38 313 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TAGLN3Q9UI15 199 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 KCNU1A8MYU2 1149 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ATG13O75143 517 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 GCATO75600 419 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 SMNDC1O75940 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
LRP6-203ENST00000538239 EPN2O95208 641 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 SNAI1O95863 264 aaPredicted RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 TBX18O95935 607 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 GNA12Q03113 381 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ILF2Q12905 390 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 AUHQ13825 339 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 TRIP4Q15650 581 aaPredicted RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 LRRC38Q5VT99 294 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 LRRC8BQ6P9F7 803 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TMC3Q7Z5M5 1100 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 FAM126BQ8IXS8 530 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 BAP1Q92560 729 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 HEPHQ9BQS7 1158 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 BLOC1S6Q9UL45 172 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 MKL2Q9ULH7 1088 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 YIPF1Q9Y548 306 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 A0A1B0GVM2 712 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TCAF2A6NFQ2 919 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 FAM220BPB1ANY3 271 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 VPS4BO75351 444 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ERAL1O75616 437 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 HLA-DQA2P01906 255 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ADH5P11766 374 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 RHOQP17081 205 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ITPKAP23677 461 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 FLT3P36888 993 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 CXCR3P49682 368 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 FOXM1Q08050 763 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 UAP1L1Q3KQV9 507 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ZC3H7AQ8IWR0 971 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 CFAP206Q8IYR0 622 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 AP2M1Q96CW1 435 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 BTBD9Q96Q07 612 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 SMG9Q9H0W8 520 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 NMUR1Q9HB89 426 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 INTS7Q9NVH2 962 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 PSME2Q9UL46 239 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ENPP3O14638 875 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PIGNO95427 931 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 NTRK1P04629 796 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ALPPL2P10696 532 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 SPAM1P38567 509 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 RAB10P61026 200 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TPGS2Q68CL5 300 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 IRGCQ6NXR0 463 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 CHST15Q7LFX5 561 aaPredicted RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 IL12RB2Q99665 862 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TRIT1Q9H3H1 467 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 TBC1D30Q9Y2I9 924 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PCDHGC4Q9Y5F7 938 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 VGLL3A8MV65 326 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 FPGTO14772 594 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 CSF2RAP15509 400 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 IDSP22304 550 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 FEN1P39748 380 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 ASPAP45381 313 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 GNPDA1P46926 289 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 SLC11A1P49279 550 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PRKAA2P54646 552 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PRKG2Q13237 762 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TAF13Q15543 124 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 AMZ1Q400G9 498 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 USP39Q53GS9 565 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 UTP15Q8TED0 518 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 SLC38A3Q99624 504 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 KXD1Q9BQD3 176 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PHACTR1Q9C0D0 580 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 NKX2-4Q9H2Z4 354 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 XPNPEP1Q9NQW7 623 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 IL36AQ9UHA7 158 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms