RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 XAF1Q6GPH4 301 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 OFCC1Q8IZS5 231 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 DHRSXQ8N5I4 330 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 PCDH20Q8N6Y1 951 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 KCTD6Q8NC69 237 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SEZ6LQ9BYH1 1024 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 UPF3AQ9H1J1 476 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CD300AQ9UGN4 299 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF229Q9UJW7 825 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 GABRQQ9UN88 632 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 MGAMO43451 1857 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 PRORSD1PA6NEY8 169 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 HNRNPDLO14979 420 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SNPHO15079 494 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 LRCH4O75427 683 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 RFPL2O75678 378 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 RASAL1O95294 804 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 EDN1P05305 212 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CDH1P12830 882 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 INSRRP14616 1297 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 PSMA2P25787 234 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 IFNA8P32881 189 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 YAP1P46937 504 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC26A2P50443 739 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 RPL14P50914 215 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CLCN3P51790 818 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 PLA2G16P53816 162 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 COPZ1P61923 177 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 HTRA3P83110 453 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 ECT2LQ008S8 904 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 ARHGEF6Q15052 776 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 PPM1JQ5JR12 505 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 C6orf10Q5SRN2 563 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 TMEM198Q66K66 360 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SPRED1Q7Z699 444 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 LACC1Q8IV20 430 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 LSMEM2Q8N112 164 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SFRP1Q8N474 314 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 ESX1Q8N693 406 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 ARFGAP1Q8N6T3 406 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CHAC2Q8WUX2 184 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CANT1Q8WVQ1 401 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SOCS4Q8WXH5 440 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 VPS33AQ96AX1 596 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 FKBP10Q96AY3 582 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SPATA17Q96L03 361 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CDK5RAP1Q96SZ6 601 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SDCBP2Q9H190 292 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 FBXO8Q9NRD0 319 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CCM2LQ9NUG4 571 aaPredicted RBP11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CNTN6Q9UQ52 1028 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 CDYLQ9Y232 598 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 RAP2CQ9Y3L5 183 aa11.43□□□□□ -0.58
SEMA4D-221ENST00000537934 LAMA2P24043 3122 aaKnown RBP11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 KPNA7A9QM74 516 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 H3BRB1 525 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 IDH3BO43837 385 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 HBP1O60381 514 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SYNCRIPO60506 623 aaKnown RBP11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 ALDH1A2O94788 518 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 NAMPTP43490 491 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 P2RX3P56373 397 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 CLCQ05315 142 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 NIPAL4Q0D2K0 466 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 CUL2Q13617 745 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SELPLGQ14242 412 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 CRTC3Q6UUV7 619 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 USP51Q70EK9 711 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 DHFR2Q86XF0 187 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 UNC5BQ8IZJ1 945 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 MPP5Q8N3R9 675 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 OR2T34Q8NGX1 318 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 OR2T3Q8NH03 318 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 RASSF5Q8WWW0 418 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF606Q8WXB4 792 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 HDAC11Q96DB2 347 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 RTP4Q96DX8 246 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 PPP1R36Q96LQ0 422 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 EMILIN2Q9BXX0 1053 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 COPG1Q9Y678 874 aaKnown RBP11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 IGKV6-21A0A0C4DH24 114 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 H7C0C1 242 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 NRP1O14786 923 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 GRID2O43424 1007 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 TRIM13O60858 407 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 UGT2B11O75310 529 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 MPSTP25325 297 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 ATP5OP48047 213 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 RALGDSQ12967 914 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC12A1Q13621 1099 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 PDK2Q15119 407 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 CYBRD1Q53TN4 286 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 NPNTQ6UXI9 565 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 TLK2Q86UE8 772 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SLCO6A1Q86UG4 719 aa11.42□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC38A6Q8IZM9 456 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms