RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 E2F2Q14209 437 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SLC1A5Q15758 541 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CYP2U1Q7Z449 544 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SYT15Q9BQS2 421 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MTRRQ9UBK8 725 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 INVSQ9Y283 1065 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 AAR2Q9Y312 384 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MAGEB16A2A368 324 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SNX4O95219 450 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PRH1P02810 166 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 IGKV5-2P06315 115 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RPS3P23396 243 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CYP2F1P24903 491 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ACADSBP45954 432 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FAM92BQ6ZTR7 304 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 IFNLR1Q8IU57 520 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SLITRK4Q8IW52 837 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ZC3H7AQ8IWR0 971 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 COLGALT2Q8IYK4 626 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 TNIP3Q96KP6 325 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 DUSP9Q99956 384 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FEM1BQ9UK73 627 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 LRFN2Q9ULH4 789 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF451Q9Y4E5 1061 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 N6AMT1Q9Y5N5 214 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ZC3H4Q9UPT8 1303 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 A0A087WZ62 844 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CHADO15335 359 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 GJB6O95452 261 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 POLD2P49005 469 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 MAN2A2P49641 1150 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 LIPMQ5VYY2 423 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PTF1AQ7RTS3 328 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FOXP4Q8IVH2 680 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 VAT1Q99536 393 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FEM1AQ9BSK4 669 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RACGAP1Q9H0H5 632 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 GANQ9H2C0 597 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ALG9Q9H6U8 611 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 COQ10BQ9H8M1 238 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PLK2Q9NYY3 685 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 COQ3Q9NZJ6 369 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 TMEM216Q9P0N5 145 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 KMT2EQ8IZD2 1858 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 AP2S1P53680 142 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 DRG2P55039 364 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SLC9A6Q92581 669 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 MRPL57Q9BQC6 102 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 BRD7Q9NPI1 651 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SORL1Q92673 2214 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 AVILO75366 819 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FAM220AQ7Z4H9 259 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SLC7A5P1Q8MH63 180 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 OR56A4Q8NGH8 313 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 TMC2Q8TDI7 906 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CEP41Q9BYV8 373 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 KCND2Q9NZV8 630 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PDE10AQ9Y233 779 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 NCKAP1Q9Y2A7 1128 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 TBC1D30Q9Y2I9 924 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PREX2Q70Z35 1606 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 KIAA1549Q9HCM3 1950 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ABCC3O15438 1527 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RGS14O43566 566 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 LSM8O95777 96 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CLK2P49760 499 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SLC18A2Q05940 514 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 KYAT1Q16773 422 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 TTLL9Q3SXZ7 439 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RALGPS1Q5JS13 557 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 TMEM179Q6ZVK1 233 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 INO80EQ8NBZ0 244 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FAXDC2Q96IV6 333 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 APBA2Q99767 749 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 HERC2P3Q9BVR0 1158 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 YIPF2Q9BWQ6 316 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 LIN28AQ9H9Z2 209 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 KBTBD4Q9NVX7 518 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PLD2O14939 933 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 HMBSP08397 361 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 LINGO3P0C6S8 592 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ACADLP28330 430 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 KLF10Q13118 480 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ERFEQ4G0M1 354 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SLC34A3Q8N130 599 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 RNF149Q8NC42 400 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ACE2Q9BYF1 805 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ANKRA2Q9H9E1 313 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 BPGMP07738 259 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PBLDP30039 288 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FAUP35544 74 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 HNMTP50135 292 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 ANXA11P50995 505 aaKnown RBP5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PPATQ06203 517 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 SMARCB1Q12824 385 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 HSD17B12Q53GQ0 312 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 FAM91A1Q658Y4 838 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 PDSS2Q86YH6 399 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 CHPFQ8IZ52 775 aa5.69□□□□□ -1.5
CSMD1-215ENST00000537824 POFUT2Q9Y2G5 429 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms