RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 CCDC126Q96EE4 140 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 PRICKLE1Q96MT3 831 aaPredicted RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 SPON2Q9BUD6 331 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 GPAMQ9HCL2 828 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 OGDHLQ9ULD0 1010 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 RIMKLBQ9ULI2 386 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 MEI4A8MW99 385 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 E9PBE3 544 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 H3BNC9 293 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 KDELR3O43731 214 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 KLHL41O60662 606 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 RPP40O75818 363 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 STC2O76061 302 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 SEC24AO95486 1093 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 NDST3O95803 873 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 S1PR4O95977 384 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 MYCP01106 439 aaPredicted RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 RHOCP08134 193 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 RBP1P09455 135 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 HOXB8P17481 243 aaPredicted RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 VEGFBP49765 207 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 ATN1P54259 1190 aaPredicted RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 RPS24P62847 133 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 GALNT3Q14435 633 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 TRMT5Q32P41 509 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 ACSBG2Q5FVE4 666 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 ACAD11Q709F0 780 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 ULK2Q8IYT8 1036 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 CCNYL1Q8N7R7 359 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 MAPK15Q8TD08 544 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 BRSK1Q8TDC3 778 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 PSKH2Q96QS6 385 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 CLSTN3Q9BQT9 956 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 THTPAQ9BU02 230 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 POMKQ9H5K3 350 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 NCKIPSDQ9NZQ3 722 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 CORO1CQ9ULV4 474 aaPredicted RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 VWA7Q9Y334 891 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 KCTD3Q9Y597 815 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 ILVBLA1L0T0 632 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 CCL22O00626 93 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 DCXO43602 365 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 GLP2RO95838 553 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 CPOXP36551 454 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 CCR10P46092 362 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 ALDH1A3P47895 512 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 NUMBP49757 651 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 PFKPQ01813 784 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 ZNF177Q13360 481 aaPredicted RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 IKBKEQ14164 716 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 NAA25Q14CX7 972 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 VEPH1Q14D04 833 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 FAM45BPQ6NSW5 357 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 MRNIPQ6NTE8 343 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 POU5F2Q8N7G0 328 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 TXNDC5Q8NBS9 432 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 GPR150Q8NGU9 434 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 ZNF461Q8TAF7 563 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 FAM45AQ8TCE6 357 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 KCNV2Q8TDN2 545 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 WDR60Q8WVS4 1066 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 DNAJC1Q96KC8 554 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 MYRFLQ96LU7 910 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 DDX50Q9BQ39 737 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 UNKQ9C0B0 810 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 CYP4F11Q9HBI6 524 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 MAN1C1Q9NR34 630 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 MARCH4Q9P2E8 410 aaPredicted RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 YIPF1Q9Y548 306 aa15.74■□□□□ 0.11
MKS1-204ENST00000537529 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.74■□□□□ 0.11
MKS1-204ENST00000537529 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 A0A1B0GVM2 712 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 TCAF2A6NFQ2 919 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 F8W8V4 182 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 ABLIM3O94929 683 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 PSMG1O95456 288 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 SOD2P04179 222 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 CCDC166P0CW27 439 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 TFEBP19484 476 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 GLDCP23378 1020 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 SLC26A3P40879 764 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 PLD1Q13393 1074 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 RCN1Q15293 331 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 CCDC6Q16204 474 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 SPOUT1Q5T280 376 aaKnown RBP15.73■□□□□ 0.11
MKS1-204ENST00000537529 CNKSR3Q6P9H4 555 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 SETD3Q86TU7 594 aaPredicted RBP15.73■□□□□ 0.11
MKS1-204ENST00000537529 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.73■□□□□ 0.11
MKS1-204ENST00000537529 LSMEM2Q8N112 164 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 SGF29Q96ES7 293 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 TRMT2BQ96GJ1 504 aaKnown RBP15.73■□□□□ 0.11
MKS1-204ENST00000537529 RSRC1Q96IZ7 334 aaKnown RBP15.73■□□□□ 0.11
MKS1-204ENST00000537529 TBATAQ96M53 351 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 OR52B2Q96RD2 323 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 TRIB3Q96RU7 358 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 CCDC28BQ9BUN5 200 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 ACSS2Q9NR19 701 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 STOML1Q9UBI4 398 aa15.73■□□□□ 0.11
MKS1-204ENST00000537529 CDYLQ9Y232 598 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms