RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 UBE3AQ05086 875 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DPYSQ14117 519 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 COL19A1Q14993 1142 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 UBE3CQ15386 1083 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TRIM71Q2Q1W2 868 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 ANKRD34AQ69YU3 496 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CRTC3Q6UUV7 619 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 IDO2Q6ZQW0 420 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TRMT1LQ7Z2T5 733 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 PAGE2Q7Z2X7 111 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 GPBP1Q86WP2 473 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 MFSD4AQ8N468 514 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ZNF366Q8N895 744 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 GALNT11Q8NCW6 608 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 OR6F1Q8NGZ6 308 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PPP1R13LQ8WUF5 828 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DDX1Q92499 740 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 TRIB2Q92519 343 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 RPL3LQ92901 407 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 USP7Q93009 1102 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 VTI1AQ96AJ9 217 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 APOPT1Q96IL0 206 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CPB2Q96IY4 423 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TXNDC15Q96J42 360 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SLC45A3Q96JT2 553 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ZNF597Q96LX8 424 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 C7orf26Q96N11 449 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 UROC1Q96N76 676 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PYM1Q9BRP8 204 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 TRAF4Q9BUZ4 470 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 FUNDC2Q9BWH2 189 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 BTBD2Q9BX70 525 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 REXO4Q9GZR2 422 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 SAV1Q9H4B6 383 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 SYTL2Q9HCH5 934 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PKD2L1Q9P0L9 805 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TMCC3Q9ULS5 477 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PADI4Q9UM07 663 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SNX6Q9UNH7 406 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 KIAA1024Q9UPX6 916 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 AURKCQ9UQB9 309 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 JAG2Q9Y219 1238 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TCAF1Q9Y4C2 921 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 AP4S1Q9Y587 144 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PSAT1Q9Y617 370 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ADGRA2Q96PE1 1338 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PTPRFP10586 1907 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TRAV6A0A075B6T7 132 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TRBV23-1A0A0A0MS06 115 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TTC24A2A3L6 582 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 KRT87PA6NCN2 255 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 OR5K4A6NMS3 321 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 LEUTXA8MZ59 168 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TEX46H3BTG2 121 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 I3L521 148 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 M0QX08 132 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SGK1O00141 431 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PLK4O00444 970 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SIGLEC5O15389 551 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 USP2O75604 605 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 CALM1P0DP23 149 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CALM2P0DP24 149 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CALM3P0DP25 149 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 RBL1P28749 1068 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CCND2P30279 289 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 NCS1P62166 190 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CREB5Q02930 508 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SIGLEC14Q08ET2 396 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 KLF10Q13118 480 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 BTN1A1Q13410 526 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PTPRCAPQ14761 206 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 EFHC2Q5JST6 749 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 FAXCQ5TGI0 409 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TXNRD3NBQ6F5E7 133 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 NAPEPLDQ6IQ20 393 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 LIPIQ6XZB0 460 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CFAP77Q6ZQR2 320 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 RETREG3Q86VR2 466 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 LYSMD2Q8IV50 215 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DDIASQ8IXT1 998 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SCML4Q8N228 414 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 AADATQ8N5Z0 425 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DAGLBQ8NCG7 672 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ASB12Q8WXK4 309 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DHX38Q92620 1227 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 SEMA4DQ92854 862 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 HLA-CQ95604 372 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DOK1Q99704 481 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SYT11Q9BT88 431 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 WACQ9BTA9 647 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CEP41Q9BYV8 373 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 UCK2Q9BZX2 261 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TINAGL1Q9GZM7 467 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 CCDC90BQ9GZT6 254 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PIH1D1Q9NWS0 290 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 GGA1Q9UJY5 639 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 IPPQ9Y573 584 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 MAGED1Q9Y5V3 778 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 GJA3Q9Y6H8 435 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SQORQ9Y6N5 450 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms