RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GP1BAP07359 652 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 PRKAR1AP10644 381 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 PYGMP11217 842 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 ODC1P11926 461 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 HGFP14210 728 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 RXRAP19793 462 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 TGM2P21980 687 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 GLRA2P23416 452 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 LEPRP48357 1165 aaKnown RBP4.13□□□□□ -1.75
YBX3-205ENST00000536107 CDH8P55286 799 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 BLOC1S1P78537 153 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 POU5F1BQ06416 359 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 C14orf28Q4W4Y0 310 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 KIAA0895LQ68EN5 471 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 ASB18Q6ZVZ8 466 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 MAEAQ7L5Y9 396 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 RAB11FIP2Q7L804 512 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 METTL23Q86XA0 190 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 RAB11FIP4Q86YS3 637 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 CMTM4Q8IZR5 234 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 THEM5Q8N1Q8 247 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 PLA2G15Q8NCC3 412 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 SPPL2BQ8TCT7 592 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 C2orf15Q8WU43 125 aaKnown RBP4.13□□□□□ -1.75
YBX3-205ENST00000536107 SLC5A5Q92911 643 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 HVCN1Q96D96 273 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 XPO6Q96QU8 1125 aaKnown RBP4.13□□□□□ -1.75
YBX3-205ENST00000536107 TCHPQ9BT92 498 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 NFKBIZQ9BYH8 718 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 POLR3FQ9H1D9 316 aaPredicted RBP4.13□□□□□ -1.75
YBX3-205ENST00000536107 LHX5Q9H2C1 402 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 ACBD3Q9H3P7 528 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 SMURF1Q9HCE7 757 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 TBC1D14Q9P2M4 693 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 PISDQ9UG56 409 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 KCND3Q9UK17 655 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 TLK1Q9UKI8 766 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 TP53TG5Q9Y2B4 290 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 CPQQ9Y646 472 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 MED13LQ71F56 2210 aa4.13□□□□□ -1.75
YBX3-205ENST00000536107 HIVEP3Q5T1R4 2406 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 A0A1W2PPC4 97 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 GAGE12BA1L429 117 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 GAGE12HA6NDE8 117 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 CCDC69A6NI79 296 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 TCP11X1B4DZS4 312 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 NEDD8-MDP1E9PL57 170 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 M0QZQ0 153 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 RNASET2O00584 256 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 GSTA4O15217 222 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 MATN4O95460 622 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 IGLV3-19P01714 112 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 DNTTP04053 509 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 HARSP12081 509 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 TCF3P15923 654 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 UGT1A5P35504 534 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 RXRGP48443 463 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 TRAPPC10P48553 1259 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 COPB1P53618 953 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 HDAC4P56524 1084 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 NXPH1P58417 271 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 ARID5AQ03989 594 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 SMARCB1Q12824 385 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 IFRD2Q12894 506 aaPredicted RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 CDKN3Q16667 212 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 DDR2Q16832 855 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 DEFB109BQ30KR1 87 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 EFL1Q7Z2Z2 1120 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 TMEM25Q86YD3 366 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 SCN4BQ8IWT1 228 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 DCP1BQ8IZD4 617 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 LILRA3Q8N6C8 439 aaPredicted RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 OR10T2Q8NGX3 314 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 OR4C6Q8NH72 309 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 PCDH19Q8TAB3 1148 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 OTUD7AQ8TE49 926 aaPredicted RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 UCMAQ8WVF2 138 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 APOBEC4Q8WW27 367 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 HDAC11Q96DB2 347 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 SERAC1Q96JX3 654 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 APOLD1Q96LR9 279 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 ZMAT2Q96NC0 199 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 MAP3K14Q99558 947 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 STRADBQ9C0K7 418 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 C2orf40Q9H1Z8 148 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 ERVMER34-1Q9H9K5 563 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 SGK2Q9HBY8 427 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 KMT5AQ9NQR1 393 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 RRN3Q9NYV6 651 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 TRPM5Q9NZQ8 1165 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 GCNT4Q9P109 453 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 TUBGCP4Q9UGJ1 667 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 NCKAP1Q9Y2A7 1128 aa4.12□□□□□ -1.75
YBX3-205ENST00000536107 TDRD15B5MCY1 1934 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 ZFC3H1O60293 1989 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 FBN1P35555 2871 aaKnown RBP4.12□□□□□ -1.75
YBX3-205ENST00000536107 FN1P02751 2386 aaKnown RBP4.11□□□□□ -1.75
YBX3-205ENST00000536107 RP1L1Q8IWN7 2480 aaPredicted RBP4.11□□□□□ -1.75
YBX3-205ENST00000536107 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.11□□□□□ -1.75
YBX3-205ENST00000536107 ZNF891A8MT65 544 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms