RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 ITGA8P53708 1063 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 PLTPP55058 493 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 ST8SIA6P61647 398 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 SNRPD1P62314 119 aaKnown RBP10.9□□□□□ -0.66
UBE3B-205ENST00000535900 RAD51Q06609 339 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 CASP8Q14790 479 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 UAP1L1Q3KQV9 507 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 ALS2CLQ60I27 953 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 EGFLAMQ63HQ2 1017 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 SDE2Q6IQ49 451 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 ZDHHC24Q6UX98 284 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 B4GALNT4Q76KP1 1039 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 TMEFF1Q8IYR6 380 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 CHPFQ8IZ52 775 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 ZCCHC9Q8N567 271 aaKnown RBP10.9□□□□□ -0.66
UBE3B-205ENST00000535900 SH2D3CQ8N5H7 860 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 NAT8LQ8N9F0 302 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 ATP11CQ8NB49 1132 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 CPT1BQ92523 772 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 TADA1Q96BN2 335 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 NUDCD1Q96RS6 583 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 NT5MQ9NPB1 228 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 ZNF446Q9NWS9 450 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 ERVW-1Q9UQF0 538 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
UBE3B-205ENST00000535900 A0A1W2PQ67 120 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 TRIM24O15164 1050 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 INSIG1O15503 277 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 METTL18O95568 372 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 IGSF6O95976 241 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 CFIP05156 583 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-205ENST00000535900 SRCP12931 536 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 GABRG2P18507 467 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 NFKB1P19838 968 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 CR2P20023 1033 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 GLDCP23378 1020 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 NTSR1P30989 418 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 PTGER3P43115 390 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 RECQLP46063 649 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-205ENST00000535900 ARL4CP56559 192 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 RHOAP61586 193 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 MRPS25P82663 173 aaKnown RBP10.89□□□□□ -0.67
UBE3B-205ENST00000535900 RPL6Q02878 288 aaKnown RBP10.89□□□□□ -0.67
UBE3B-205ENST00000535900 FOXC1Q12948 553 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 CYTH1Q15438 398 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 GEN1Q17RS7 908 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 DNAJC21Q5F1R6 531 aaKnown RBP10.89□□□□□ -0.67
UBE3B-205ENST00000535900 CFAP58Q5T655 872 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 KCTD11Q693B1 232 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 SYT12Q8IV01 421 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 PDIK1LQ8N165 341 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 FBXO25Q8TCJ0 367 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 LRRN4Q8WUT4 740 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 PRCCQ92733 491 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-205ENST00000535900 LRRC39Q96DD0 335 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 ERLEC1Q96DZ1 483 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 LRIG1Q96JA1 1093 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 GDAP1L1Q96MZ0 367 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 TUBGCP5Q96RT8 1024 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 TXLNGYQ9BZA5 131 aa10.89□□□□□ -0.67
UBE3B-205ENST00000535900 EVLQ9UI08 416 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-205ENST00000535900 TP73O15350 636 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SOCS5O75159 536 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 POP4O95707 220 aaKnown RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 HOXD12P35452 270 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 ATXN3P54252 364 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 RPL26P61254 145 aaKnown RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SHC2P98077 582 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 ITKQ08881 620 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 GPS2Q13227 327 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 LAMB3Q13751 1172 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 HIF1AQ16665 826 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 MAP7D1Q3KQU3 841 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 C22orf39Q6P5X5 142 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 LRRC8BQ6P9F7 803 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 LINGO4Q6UY18 593 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SLC36A4Q6YBV0 504 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 CENPUQ71F23 418 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 TRMT10CQ7L0Y3 403 aaKnown RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 TMC3Q7Z5M5 1100 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 CROCCP2Q86T23 111 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SRLQ86TD4 932 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 CCNJLQ8IV13 435 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 FRMD1Q8N878 549 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 OR2AP1Q8NGE2 309 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 ARRDC2Q8TBH0 407 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 ZNF419Q96HQ0 510 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 FEM1CQ96JP0 617 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SRPK1Q96SB4 655 aaKnown RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SEMA3CQ99985 751 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 NAT9Q9BTE0 207 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 FSD1LQ9BXM9 530 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 CEP41Q9BYV8 373 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 CPEB1Q9BZB8 566 aaKnown RBP10.88□□□□□ -0.67
UBE3B-205ENST00000535900 CIPCQ9C0C6 399 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 ARNT2Q9HBZ2 717 aa10.88□□□□□ -0.67
UBE3B-205ENST00000535900 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms