RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TSPAN6O43657 245 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 OPHN1O60890 802 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 GCATO75600 419 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 PCDH8O95206 1070 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 EPN2O95208 641 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 MT-CYBP00156 380 aaPredicted RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 PRLP01236 227 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 ITGAVP06756 1048 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 MAOBP27338 520 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 MAT2AP31153 395 aaKnown RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 SEMG2Q02383 582 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 PTPRRQ15256 657 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 SLC14A2Q15849 920 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 TMEM259Q4ZIN3 620 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 SEL1L3Q68CR1 1132 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 ITPRIPL1Q6GPH6 555 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 NEK5Q6P3R8 708 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 DRICH1Q6PGQ1 229 aaPredicted RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 SYT10Q6XYQ8 523 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 TRIM69Q86WT6 500 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 PIH1D2Q8WWB5 315 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 DNASE2BQ8WZ79 361 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 SNX19Q92543 992 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 RTP4Q96DX8 246 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 OXNAD1Q96HP4 312 aaPredicted RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 FCRL5Q96RD9 977 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 NAP1L3Q99457 506 aaPredicted RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 GORASP1Q9BQQ3 440 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 ORAI3Q9BRQ5 295 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 AP1M1Q9BXS5 423 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 EBF2Q9HAK2 575 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 PCDH9Q9HC56 1237 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 UBP1Q9NZI7 540 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 RSPH14Q9UHP6 348 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 PHTF1Q9UMS5 762 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 DRG1Q9Y295 367 aaKnown RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 SAR1BQ9Y6B6 198 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 SLCO1B1Q9Y6L6 691 aa12.14□□□□□ -0.47
CHD4-203ENST00000535717 RIF1Q5UIP0 2472 aaKnown RBP12.14□□□□□ -0.47
CHD4-203ENST00000535717 PMPCBO75439 489 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 RETP07949 1114 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 CTPS1P17812 591 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 CA4P22748 312 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 PSMB4P28070 264 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 CASQ1P31415 396 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 STIP1P31948 543 aaKnown RBP12.13□□□□□ -0.47
CHD4-203ENST00000535717 MMP12P39900 470 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 KCNJ1P48048 391 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 RPS21P63220 83 aaKnown RBP12.13□□□□□ -0.47
CHD4-203ENST00000535717 FAM193AP78312 1265 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 CREB5Q02930 508 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 ELP6Q0PNE2 266 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 PCSK7Q16549 785 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 TMEM52BQ4KMG9 183 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 WDR45BQ5MNZ6 344 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 KIAA1161Q6NSJ0 714 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 ERAP2Q6P179 960 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 KDELC1Q6UW63 502 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 ASCL5Q7RTU5 278 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 CYP2U1Q7Z449 544 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 KDELC2Q7Z4H8 507 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 ZSCAN30Q86W11 494 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 HORMAD1Q86X24 394 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 CREG2Q8IUH2 290 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 RGL4Q8IZJ4 473 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 C1orf216Q8TAB5 229 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 PIGKQ92643 395 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 KLK6Q92876 244 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 FEM1CQ96JP0 617 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 CAPZA3Q96KX2 299 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 C16orf45Q96MC5 204 aaPredicted RBP12.13□□□□□ -0.47
CHD4-203ENST00000535717 SMIM14Q96QK8 99 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 MCCC1Q96RQ3 725 aaPredicted RBP12.13□□□□□ -0.47
CHD4-203ENST00000535717 TRIB3Q96RU7 358 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 WRAP53Q9BUR4 548 aaKnown RBP12.13□□□□□ -0.47
CHD4-203ENST00000535717 ARRDC1-AS1Q9H2J1 176 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 HOMER3Q9NSC5 361 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 TMEM74BQ9NUR3 256 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 FAM153AQ9UHL3 310 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 EIF2B4Q9UI10 523 aaKnown RBP12.13□□□□□ -0.47
CHD4-203ENST00000535717 PILRBQ9UKJ0 227 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 PRDM4Q9UKN5 801 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 PPIL1Q9Y3C6 166 aa12.13□□□□□ -0.47
CHD4-203ENST00000535717 ATXN2Q99700 1313 aaKnown RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 A0A1W2PPC4 97 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 IGLON5A6NGN9 336 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 NPIPB15A6NHN6 443 aaPredicted RBP12.12□□□□□ -0.47
CHD4-203ENST00000535717 A8MX80 341 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 MMP20O60882 483 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 METTL18O95568 372 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 IFNB1P01574 187 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 ALPIP09923 528 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 ETS1P14921 441 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 CD27P26842 260 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 LIG3P49916 1009 aa12.12□□□□□ -0.47
CHD4-203ENST00000535717 WNT3AP56704 352 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms