RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 RANBP17Q9H2T7 1088 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ABHD16BQ9H3Z7 469 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 TTC12Q9H892 705 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 PLEKHA2Q9HB19 425 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 MTMR4Q9NYA4 1195 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 KLQ9UEF7 1012 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CD207Q9UJ71 328 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF112Q9UJU3 913 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ADAM21Q9UKJ8 722 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 COG5Q9UP83 839 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 LZTS1Q9Y250 596 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CNPY2Q9Y2B0 182 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 PIEZO1Q92508 2521 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 DDX60LQ5H9U9 1706 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ZNFX1Q9P2E3 1918 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 SPEF2Q9C093 1822 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ARAP2Q8WZ64 1704 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 OR6C68A6NDL8 312 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 SH2D7A6NKC9 451 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 B9A039 149 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 KBTBD13C9JR72 458 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 STX16-NPEPL1H3BU86 382 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CHL1O00533 1208 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 STX16O14662 325 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 MGST3O14880 152 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 SLPIP03973 132 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CHRM4P08173 479 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 MMP3P08254 477 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 MYZAPP0CAP1 466 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 YWHAQP27348 245 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 MAPK4P31152 587 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 GJC1P36383 396 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CASP2P42575 452 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 GPR12P47775 334 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 RPP30P78346 268 aaKnown RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CCNA1P78396 465 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 SHHQ15465 462 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 NFIL3Q16649 462 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CCDC57Q2TAC2 916 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 EDRF1Q3B7T1 1238 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM119Q4V9L6 283 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 DCAF6Q58WW2 860 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF484Q5JVG2 852 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF362Q5T0B9 420 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CCDC30Q5VVM6 783 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 AAGABQ6PD74 315 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF474Q6S9Z5 364 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ADGRG6Q86SQ4 1221 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ANKRD13BQ86YJ7 626 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 RFX6Q8HWS3 928 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CCDC105Q8IYK2 499 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 GHDCQ8N2G8 530 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 C11orf65Q8NCR3 313 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 OR1N1Q8NGS0 311 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 RFWD2Q8NHY2 731 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 LPAR1Q92633 364 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 HTRA1Q92743 480 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 MAP4K1Q92918 833 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 SAAL1Q96ER3 474 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 MPP4Q96JB8 637 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM79Q9BSE2 394 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 TRMOQ9BU70 441 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 GPR63Q9BZJ6 419 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM39BQ9GZU3 492 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 CLPBQ9H078 707 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 OSBPL5Q9H0X9 879 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 BEX4Q9NWD9 120 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ARL15Q9NXU5 204 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 IFT80Q9P2H3 777 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 SERGEFQ9UGK8 458 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 PKP3Q9Y446 797 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ZHX2Q9Y6X8 837 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 EYSQ5T1H1 3165 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 PLXNA1Q9UIW2 1896 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 ZSWIM8A7E2V4 1837 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 SMCHD1A6NHR9 2005 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 SSC5DA1L4H1 1573 aa3.51□□□□□ -1.85
SNHG1-202ENST00000535689 RPAP1Q9BWH6 1393 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-202ENST00000535689 COL2A1P02458 1487 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 A0A096LPK6 155 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 ARHGAP10A1A4S6 786 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 TISP43B9A030 160 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 C19orf81C9J6K1 198 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 M0QYT0 321 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 M0QZQ0 153 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 DNM1LO00429 736 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 KLK10O43240 276 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 HEXIM1O94992 359 aaKnown RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 IL1AP01583 271 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 RFPL3SP0C7P2 107 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 PCNAP12004 261 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 KELP23276 732 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 PAX3P23760 479 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 TBXAS1P24557 533 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 PSMA4P25789 261 aaKnown RBP3.5□□□□□ -1.85
SNHG1-202ENST00000535689 PTGER1P34995 402 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 SLC16A2P36021 539 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 RGS2P41220 211 aa3.5□□□□□ -1.85
SNHG1-202ENST00000535689 GABRB2P47870 512 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms