RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 NEMP1O14524 444 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 TPP1O14773 563 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 LZTS3O60299 673 aaPredicted RBP10.9□□□□□ -0.66
CCDC60-202ENST00000535685 TM7SF2O76062 418 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 SERPING1P05155 500 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 GP1BAP07359 652 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 ALPPL2P10696 532 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 CKMT1AP12532 417 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 HNRNPH3P31942 346 aaKnown RBP10.9□□□□□ -0.66
CCDC60-202ENST00000535685 PEX5P50542 639 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 IL10RBQ08334 325 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 PTK2BQ14289 1009 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 UGP2Q16851 508 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 LEKR1Q6ZMV7 388 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 PTAR1Q7Z6K3 402 aaPredicted RBP10.9□□□□□ -0.66
CCDC60-202ENST00000535685 LUZP1Q86V48 1076 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 VPS36Q86VN1 386 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 PARGQ86W56 976 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 ZNF354CQ86Y25 554 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 BTN2A2Q8WVV5 523 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 TEKT4Q8WW24 435 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 ECHDC3Q96DC8 303 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 OCSTAMPQ9BR26 566 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 NRSN2Q9GZP1 204 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 UCKL1Q9NWZ5 548 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 CWC15Q9P013 229 aaKnown RBP10.9□□□□□ -0.66
CCDC60-202ENST00000535685 PCSK1NQ9UHG2 260 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 GGT7Q9UJ14 662 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 ATRXP46100 2492 aa10.9□□□□□ -0.67
CCDC60-202ENST00000535685 COL27A1Q8IZC6 1860 aaPredicted RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 NBEAQ8NFP9 2946 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 H3BM21 787 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 INSIG1O15503 277 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 DAPK3O43293 454 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 BUB1BO60566 1050 aaPredicted RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 SDC3O75056 442 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 CYP1A2P05177 515 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 JUPP14923 745 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 IL1R2P27930 398 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 IGFALSP35858 605 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 HSPA9P38646 679 aaKnown RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 DUSP3P51452 185 aaPredicted RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 RENBPP51606 427 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 EIF2B5Q13144 721 aaKnown RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 RTP5Q14D33 572 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 POLNQ7Z5Q5 900 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 SRLQ86TD4 932 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 NPWQ8N729 165 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 DCBLD1Q8N8Z6 715 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 TP53I13Q8NBR0 393 aaPredicted RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 FAM71BQ8TC56 605 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 CXorf40AQ8TE69 158 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 CELF6Q96J87 481 aaKnown RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 PSKH2Q96QS6 385 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 ARHGAP9Q9BRR9 750 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 ZWILCHQ9H900 591 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 DNAJC28Q9NX36 388 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 NCKIPSDQ9NZQ3 722 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 RCOR3Q9P2K3 495 aaPredicted RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 IP6K2Q9UHH9 426 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 IPO11Q9UI26 975 aaKnown RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 SALL4Q9UJQ4 1053 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 NENFQ9UMX5 172 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 ITM2BQ9Y287 266 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 LUC7L2Q9Y383 392 aaKnown RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 AHCTF1Q8WYP5 2266 aa10.89□□□□□ -0.67
CCDC60-202ENST00000535685 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
CCDC60-202ENST00000535685 LY6G6EA0A0G2JKS1 128 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 A0A1W2PQ67 120 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 GOLGA6L19H0YKK7 550 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 H3BRJ5 948 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 K7ESM1 405 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 TRAFD1O14545 582 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 MMP20O60882 483 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 PALMO75781 387 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 ARL4AP40617 200 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 AP1S1P61966 158 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 INSM1Q01101 510 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 PDE1CQ14123 709 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 TDRD12Q587J7 1177 aaKnown RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 PPP6R3Q5H9R7 873 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 RALGPS1Q5JS13 557 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 TPRG1LQ5T0D9 272 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 HES3Q5TGS1 186 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 CDCP2Q5VXM1 449 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 ZCCHC8Q6NZY4 707 aaKnown RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 ALKBH5Q6P6C2 394 aaKnown RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 IGSF10Q6WRI0 2623 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 MACC1Q6ZN28 852 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 LRRC49Q8IUZ0 686 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 SDR16C5Q8N3Y7 309 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 ZNF548Q8NEK5 533 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 MDM1Q8TC05 714 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 NXPE2Q96DL1 559 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 APOLD1Q96LR9 279 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 ATP13A3Q9H7F0 1226 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 SP110Q9HB58 689 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms