RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 FAM45AQ8TCE6 357 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 RETREG1Q9H6L5 497 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 GMIPQ9P107 970 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 TCAF2A6NFQ2 919 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 AURKAO14965 403 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 CCDC166P0CW27 439 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 HAPLN1P10915 354 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-204ENST00000534947 ME2P23368 584 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 PBX3P40426 434 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 MAPKAPK2P49137 400 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 CLCN2P51788 898 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 THOP1P52888 689 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 RING1Q06587 406 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 CACNB2Q08289 660 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-204ENST00000534947 ITKQ08881 620 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 FLOT2Q14254 428 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 SQLEQ14534 574 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 TFAP2DQ7Z6R9 452 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 ZNF280BQ86YH2 543 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 GPR150Q8NGU9 434 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 ARRDC2Q8TBH0 407 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 L3HYPDHQ96EM0 354 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 PPP1R36Q96LQ0 422 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.88■□□□□ 0.61
COPS7A-204ENST00000534947 GTSE1Q9NYZ3 720 aa18.88■□□□□ 0.61
COPS7A-204ENST00000534947 OR6C75A6NL08 312 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 CA12O43570 354 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 B4GALT3O60512 393 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 S1PR4O95977 384 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 HLA-DPA1P20036 260 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 YWHAQP27348 245 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 PEX2P28328 305 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 FLT3LGP49771 235 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 PRAMEP78395 509 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 DSC2Q02487 901 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 STX5Q13190 355 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 TRIP10Q15642 601 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 DDR2Q16832 855 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 ALFQ53S48 1182 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 SFT2D3Q587I9 215 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 SIRPB2Q5JXA9 342 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 CLLU1OSQ5K130 101 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 TMEM198Q66K66 360 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 KDELC2Q7Z4H8 507 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 SAPCD2Q86UD0 394 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 SPATA6LQ8N4H0 392 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 SPPL2BQ8TCT7 592 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 PABPC5Q96DU9 382 aaKnown RBP18.87■□□□□ 0.61
COPS7A-204ENST00000534947 FEM1CQ96JP0 617 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 NDNQ99608 321 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 EBF3Q9H4W6 596 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 POPDC3Q9HBV1 291 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 ACSS2Q9NR19 701 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 TLR8Q9NR97 1041 aaKnown RBP18.87■□□□□ 0.61
COPS7A-204ENST00000534947 GABRQQ9UN88 632 aa18.87■□□□□ 0.61
COPS7A-204ENST00000534947 MOXD2PA6NHM9 499 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 RAMP2O60895 175 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 BCAS2O75934 225 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 FGF1P05230 155 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 ATXN1LP0C7T5 689 aaKnown RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 COL6A1P12109 1028 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 IMPDH1P20839 514 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 EFEMP1Q12805 493 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 SERINC3Q13530 473 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 ZNF789Q5FWF6 425 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 FBXL22Q6P050 247 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 PSMG2Q969U7 264 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 ZNF599Q96NL3 588 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 ASB2Q96Q27 587 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 YIPF3Q9GZM5 350 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 UXTQ9UBK9 157 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 TMEM233B4DJY2 109 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 LDB2O43679 373 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 CNTN5O94779 1100 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 ATP4BP51164 291 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 KPNA1P52294 538 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 USP46P62068 366 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 MRPL58Q14197 206 aaKnown RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 POLD3Q15054 466 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 VARS2Q5ST30 1063 aaKnown RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 LPCAT4Q643R3 524 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 RTN4RL1Q86UN2 441 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 CUZD1Q86UP6 607 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 ICA1LQ8NDH6 482 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 HIPK4Q8NE63 616 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 TOP1MTQ969P6 601 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 SGF29Q96ES7 293 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 MRPL1Q9BYD6 325 aaKnown RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 POLR1EQ9GZS1 481 aaKnown RBP18.86■□□□□ 0.61
COPS7A-204ENST00000534947 MARCH2Q9P0N8 246 aa18.86■□□□□ 0.61
COPS7A-204ENST00000534947 FESP07332 822 aa18.85■□□□□ 0.61
COPS7A-204ENST00000534947 UBTFL6P0CB48 400 aaPredicted RBP18.85■□□□□ 0.61
COPS7A-204ENST00000534947 ALDH1A3P47895 512 aa18.85■□□□□ 0.61
COPS7A-204ENST00000534947 MAXP61244 160 aa18.85■□□□□ 0.61
COPS7A-204ENST00000534947 SMARCB1Q12824 385 aa18.85■□□□□ 0.61
COPS7A-204ENST00000534947 CEACAM7Q14002 265 aa18.85■□□□□ 0.61
COPS7A-204ENST00000534947 RARS2Q5T160 578 aaKnown RBP18.85■□□□□ 0.61
COPS7A-204ENST00000534947 ALG1LQ6GMV1 187 aa18.85■□□□□ 0.61
COPS7A-204ENST00000534947 EFCAB3Q8N7B9 438 aa18.85■□□□□ 0.61
COPS7A-204ENST00000534947 FBXO32Q969P5 355 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms