RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	MED8	Q96G25	268 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	LIN37	Q96GY3	246 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	KLHL32	Q96NJ5	620 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	USB1	Q9BQ65	265 aa	Known RBP	11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	TUBGCP2	Q9BSJ2	902 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	LRRC61	Q9BV99	259 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	CPEB1	Q9BZB8	566 aa	Known RBP	11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	SLC13A1	Q9BZW2	595 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	TTYH3	Q9C0H2	523 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	CLPB	Q9H078	707 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	SAMSN1	Q9NSI8	373 aa	Known RBP	11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	IMPACT	Q9P2X3	320 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	GGT7	Q9UJ14	662 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	ACSL6	Q9UKU0	697 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	PADI4	Q9UM07	663 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	NEU3	Q9UQ49	428 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	PCDHGA7	Q9Y5G6	932 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	FHOD1	Q9Y613	1164 aa		11.68	□□□□□ -0.54
CTNND1-238	ENST00000534647	TDRD6	O60522	2096 aa	Known RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	hCG_2014768	A0A024R1R8	64 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	ESPN	B1AK53	854 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	FAM72C	H0Y354	149 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	TMX2-CTNND1	H3BSU7	103 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	MUSK	O15146	869 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	RAMP2	O60895	175 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	TM7SF2	O76062	418 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	LRIG2	O94898	1065 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	CYP1A1	P04798	512 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	UGT2B4	P06133	528 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	ATP1A3	P13637	1013 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	TSHR	P16473	764 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	GK	P32189	559 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	IGFALS	P35858	605 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	EIF4A3	P38919	411 aa	Known RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	PDX1	P52945	283 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	GSDMD	P57764	484 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	YBEY	P58557	167 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	ATP11A	P98196	1134 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	PPARD	Q03181	441 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	RAD51	Q06609	339 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	EIF3I	Q13347	325 aa	Known RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	ELOC	Q15369	112 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	TMEM52B	Q4KMG9	183 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	C2CD6	Q53TS8	623 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	FAM72A	Q5TYM5	149 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	FAM72D	Q6L9T8	149 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	FAM72B	Q86X60	149 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	RBFA	Q8N0V3	343 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	RYBP	Q8N488	228 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	OR6C4	Q8NGE1	309 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	SCG3	Q8WXD2	468 aa	Known RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	NTAN1	Q96AB6	310 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	DMRTB1	Q96MA1	342 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	GDAP1L1	Q96MZ0	367 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	CCDC3	Q9BQI4	270 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	SEMA4C	Q9C0C4	833 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	DNAI1	Q9UI46	699 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	NOCT	Q9UK39	431 aa	Known RBP	11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	ITM2B	Q9Y287	266 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	ATM	Q13315	3056 aa		11.67	□□□□□ -0.54
CTNND1-238	ENST00000534647	C2CD4B	A6NLJ0	364 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647		F8VZ95	297 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	NRDC	O43847	1150 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	MMP20	O60882	483 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	TNFSF15	O95150	251 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	MME	P08473	750 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	PLEK	P08567	350 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	ALPI	P09923	528 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	TIMP2	P16035	220 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	SDC4	P31431	198 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	HK3	P52790	923 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	GSC	P56915	257 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	CLN3	Q13286	438 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	C1orf61	Q13536	156 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	SPIDR	Q14159	915 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	LY6D	Q14210	128 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	NAA30	Q147X3	362 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	TCEAL1	Q15170	157 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	RAB6C	Q53S08	254 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	HSP90AA4P	Q58FG1	418 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	FAXC	Q5TGI0	409 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	CDKAL1	Q5VV42	579 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	TAF3	Q5VWG9	929 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	NAA35	Q5VZE5	725 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	RWDD4	Q6NW29	188 aa	Known RBP	11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	CCDC81	Q6ZN84	652 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	VPS36	Q86VN1	386 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	EMC1	Q8N766	993 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	ARL10	Q8N8L6	244 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	OR6K2	Q8NGY2	324 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	CXorf40A	Q8TE69	158 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	RXFP2	Q8WXD0	754 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	TBC1D31	Q96DN5	1066 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	CCNL2	Q96S94	520 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	RAB6C	Q9H0N0	254 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	HSD3B7	Q9H2F3	369 aa		11.66	□□□□□ -0.54
CTNND1-238	ENST00000534647	NOL6	Q9H6R4	1146 aa	Known RBP	11.66	□□□□□ -0.54

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