RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 IL17AQ16552 155 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 NFE2Q16621 373 aaPredicted RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SOWAHAQ2M3V2 549 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 POM121L1PQ3SYA9 428 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF542PQ5EBM4 170 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZC3H12BQ5HYM0 836 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 MDH1BQ5I0G3 518 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 GALNT17Q6IS24 598 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SLC39A4Q6P5W5 647 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 BLOC1S2Q6QNY1 142 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 CRELD2Q6UXH1 353 aaPredicted RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF662Q6ZS27 426 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 DENND5BQ6ZUT9 1274 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 KANSL1Q7Z3B3 1105 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 VASH2Q86V25 355 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZC3H3Q8IXZ2 948 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 GSPT2Q8IYD1 628 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 C4orf32Q8N8J7 132 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SYT2Q8N9I0 419 aaPredicted RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ENGASEQ8NFI3 743 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 GANCQ8TET4 914 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 HTR3CQ8WXA8 447 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 RFFLQ8WZ73 363 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 FBXW5Q969U6 566 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ARRDC3Q96B67 414 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 BICD1Q96G01 975 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SGSM3Q96HU1 749 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SPATA17Q96L03 361 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 IPO9Q96P70 1041 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 CCNL2Q96S94 520 aaPredicted RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 AGAP2Q99490 1192 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 MRPL45Q9BRJ2 306 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 NTPCRQ9BSD7 190 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 MSTO1Q9BUK6 570 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ACE2Q9BYF1 805 aaPredicted RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF518BQ9C0D4 1074 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 LHX5Q9H2C1 402 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 DPEP3Q9H4B8 488 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF703Q9H7S9 590 aaPredicted RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 PRSS16Q9NQE7 514 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 AASDHPPTQ9NRN7 309 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 TBC1D14Q9P2M4 693 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SEL1LQ9UBV2 794 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 Q9UFV3 132 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SERGEFQ9UGK8 458 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 CPSF3Q9UKF6 684 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 NFE2L3Q9Y4A8 694 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 DAAM1Q9Y4D1 1078 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 TRAF6Q9Y4K3 522 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SNX9Q9Y5X1 595 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 MYO18AQ92614 2054 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 NAV3Q8IVL0 2385 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 PTPRJQ12913 1337 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 PHLPP2Q6ZVD8 1323 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 MYOFQ9NZM1 2061 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 NUMA1Q14980 2115 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 TNRC6BQ9UPQ9 1833 aaKnown RBP3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 APCP25054 2843 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 A0A0B4J269 797 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 LY6G6EA0A0G2JKS1 128 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 A0A1W2PPC4 97 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 A0A1W2PRX2 142 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 CPED1A4D0V7 1026 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 GOLGA8IPA6NC78 632 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 GOLGA8JA6NMD2 632 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 AQP7O14520 342 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 GABRDO14764 452 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 GSTA4O15217 222 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 OGTO15294 1046 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 PAPSS1O43252 624 aaPredicted RBP3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 MTSS1O43312 755 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 SLC26A4O43511 780 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 CACNG3O60359 315 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 DIAPH2O60879 1101 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 HUS1O60921 280 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 RTN2O75298 545 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 NEBLO76041 1014 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 HMBSP08397 361 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 THEGLP0DJG4 465 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 GIMD1P0DJR0 217 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 PYGMP11217 842 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 HGFP14210 728 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 ACP1P24666 158 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 TNFRSF8P28908 595 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 RBMS1P29558 406 aaKnown RBP3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 KRT2P35908 639 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 ANP32AP39687 249 aaKnown RBP3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 DCTP40126 519 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 MAGEA11P43364 429 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 NUMBP49757 651 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 LIG4P49917 911 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 METAP1P53582 386 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 BCAT1P54687 386 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 MFAP3P55082 362 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 MLLT10P55197 1068 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 CDH8P55286 799 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 EVCP57679 992 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 NXPH1P58417 271 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 ERVPABLB-1P60509 514 aa3.1□□□□□ -1.91
CHMP4A-208ENST00000534106 TFAMQ00059 246 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms