RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CTIF	O43310	598 aa	Known RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	TLX3	O43711	291 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	SEC14L2	O76054	403 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	ATP5B	P06576	529 aa	Known RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	TNNT1	P13805	278 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	STMN1	P16949	149 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	CDH2	P19022	906 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	TFEB	P19484	476 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	SOX2	P48431	317 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	LINC00205	P59089	165 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	UBXN1	Q04323	297 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	RNASEL	Q05823	741 aa	Known RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	AIMP2	Q13155	320 aa	Known RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	THOC5	Q13769	683 aa	Known RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	CRYM	Q14894	314 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	P3H1	Q32P28	736 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	RAB41	Q5JT25	222 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	MANEA	Q5SRI9	462 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	ERMARD	Q5T6L9	678 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	TATDN1	Q6P1N9	297 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	RAPH1	Q70E73	1250 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	ADGRG6	Q86SQ4	1221 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	RFX6	Q8HWS3	928 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	CCDC170	Q8IYT3	715 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	TEX9	Q8N6V9	391 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	KAT2B	Q92831	832 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	ZNF653	Q96CK0	615 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	PGAP3	Q96FM1	320 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	MASTL	Q96GX5	879 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	CCDC34	Q96HJ3	373 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	FNBP1	Q96RU3	617 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	TSPAN18	Q96SJ8	248 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	MYCBP	Q99417	103 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	SLC35C2	Q9NQQ7	365 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979	ODF2L	Q9ULJ1	636 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	CCL27	Q9Y4X3	112 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	WDR7	Q9Y4E6	1490 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	RAPGEF2	Q9Y4G8	1499 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979		A0A1W2PQM1	296 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	MYO1G	B0I1T2	1018 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	ZNF814	B7Z6K7	855 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979		M0QYT0	321 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	RTCA	O00442	366 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	BCAT2	O15382	392 aa	Predicted RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	SLU7	O95391	586 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	IGHD	P01880	384 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	CRYAB	P02511	175 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	MT-ND3	P03897	115 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	EIF2S1	P05198	315 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	PSG1	P11464	419 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	RARG	P13631	454 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	SCP2	P22307	547 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	HSD17B4	P51659	736 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	PRELP	P51888	382 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	TNFAIP1	Q13829	316 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	ODF2	Q5BJF6	829 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	KLHL35	Q6PF15	583 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	C11orf88	Q6PI97	169 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	ADGRA1	Q86SQ6	560 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	ARL6IP6	Q8N6S5	226 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	POMGNT2	Q8NAT1	580 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	TDRD5	Q8NAT2	981 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	SLC44A5	Q8NCS7	719 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	TNIP2	Q8NFZ5	429 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	GDAP1	Q8TB36	358 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	ARHGEF2	Q92974	986 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	CCDC47	Q96A33	483 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	VPS33A	Q96AX1	596 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	ABHD1	Q96SE0	405 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	CD180	Q99467	661 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	EIF3C	Q99613	913 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	HTATIP2	Q9BUP3	242 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	SCNM1	Q9BWG6	230 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	APOL6	Q9BWW8	343 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	KRTAP1-5	Q9BYS1	174 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	CDCP1	Q9H5V8	836 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	MOV10	Q9HCE1	1003 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	KCNK9	Q9NPC2	374 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	TLR8	Q9NR97	1041 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.86	□□□□□ -1.63
ATM-223	ENST00000533979	ALKBH4	Q9NXW9	302 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	EHD2	Q9NZN4	543 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	CD207	Q9UJ71	328 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	PCDHB7	Q9Y5E2	793 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	PCDHA10	Q9Y5I2	948 aa		4.86	□□□□□ -1.63
ATM-223	ENST00000533979	TRBV5-3	A0A0A0MS03	114 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979	IGLV5-39	A0A0G2JS06	123 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979	FRMD3	A2A2Y4	597 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979	AGAP5	A6NIR3	686 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979	TEX22	C9J3V5	150 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979		F8W810	466 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979		M0QZQ0	153 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979	SYN3	O14994	580 aa		4.85	□□□□□ -1.63
ATM-223	ENST00000533979	OR2C1	O95371	312 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms