RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 DDA1Q9BW61 102 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.55□□□□□ -0.4
CAPN1-223ENST00000533079 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 DOCK4Q8N1I0 1966 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 NBPF19A0A087WUL8 3843 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 BICDL2A1A5D9 508 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 ZSCAN5CA6NGD5 496 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-223ENST00000533079 IGSF6O95976 241 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 KELP23276 732 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 GKP32189 559 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 NRG1Q02297 640 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-223ENST00000533079 TRA2AQ13595 282 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN1-223ENST00000533079 NR1D2Q14995 579 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 C16orf72Q14CZ0 275 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 NCAPHQ15003 741 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 TMEM52BQ4KMG9 183 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 ARTNQ5T4W7 220 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 PIM3Q86V86 326 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 DRC7Q8IY82 874 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 IL22RA1Q8N6P7 574 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 HCAR2Q8TDS4 363 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 SHC3Q92529 594 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 TBCBQ99426 244 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 APOOQ9BUR5 198 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 MAGEH1Q9H213 219 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 ACP6Q9NPH0 428 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 IGSF5Q9NSI5 407 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 MFHAS1Q9Y4C4 1052 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 SNX10Q9Y5X0 201 aa12.54□□□□□ -0.4
CAPN1-223ENST00000533079 ENO4A6NNW6 628 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 BECN2A8MW95 431 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-223ENST00000533079 XPAP23025 273 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-223ENST00000533079 KRT9P35527 623 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 CD97P48960 835 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 KIAA1024LP59773 190 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 PTK2Q05397 1052 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 INPP5AQ14642 412 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 GRM3Q14832 879 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 IGFBP7Q16270 282 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
CAPN1-223ENST00000533079 WSCD2Q2TBF2 565 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 RD3Q7Z3Z2 195 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TMPRSS9Q7Z410 1059 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 BNIPLQ7Z465 357 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 ZNF438Q7Z4V0 828 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TAF8Q7Z7C8 310 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 ATCAYQ86WG3 371 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 MLKLQ8NB16 471 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 FAM46DQ8NEK8 389 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 OR56A4Q8NGH8 313 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 SLC45A3Q96JT2 553 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 EFHD1Q9BUP0 239 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 WRAP53Q9BUR4 548 aaKnown RBP12.53□□□□□ -0.4
CAPN1-223ENST00000533079 ASPSCR1Q9BZE9 553 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 SEMA6CQ9H3T2 930 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
CAPN1-223ENST00000533079 TSPAN11A1L157 253 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 BLACEA4D250 179 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 CFAP69A5D8W1 941 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 SMTNL1A8MU46 457 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 B4DGG1 531 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 CACNB4O00305 520 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-223ENST00000533079 TNFRSF10CO14798 259 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 RAMP2O60895 175 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 LIFP15018 202 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 UGT1A3P35503 534 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 ACVRL1P37023 503 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 USP8P40818 1118 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 GABRB2P47870 512 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 RAB15P59190 212 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 B4GALNT1Q00973 533 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 LRRC73Q5JTD7 316 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 FAM102AQ5T9C2 384 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-223ENST00000533079 MANEALQ5VSG8 457 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 ERAP2Q6P179 960 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 SARM1Q6SZW1 724 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 ARCQ7LC44 396 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 IRF2BP1Q8IU81 584 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 CACNA2D3Q8IZS8 1091 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 MIB2Q96AX9 1013 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 TEFMQ96QE5 360 aaKnown RBP12.52□□□□□ -0.41
CAPN1-223ENST00000533079 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 TMEM248Q9NWD8 314 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 OR1A2Q9Y585 309 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 ACTL7AQ9Y615 435 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.41
CAPN1-223ENST00000533079 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
CAPN1-223ENST00000533079 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
CAPN1-223ENST00000533079 TMCC1O94876 653 aa12.51□□□□□ -0.41
CAPN1-223ENST00000533079 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms