RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PLD5Q8N7P1 536 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 SPC24Q8NBT2 197 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-210ENST00000532935 LRRN4Q8WUT4 740 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 FATE1Q969F0 183 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 RNF25Q96BH1 459 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-210ENST00000532935 CENPTQ96BT3 561 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 HDAC11Q96DB2 347 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 ZNF830Q96NB3 372 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-210ENST00000532935 CDC6Q99741 560 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 BAG1Q99933 345 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-210ENST00000532935 C1QTNF7Q9BXJ2 289 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 MAK16Q9BXY0 300 aaKnown RBP15.48■□□□□ 0.07
CPSF1-210ENST00000532935 GOLPH3Q9H4A6 298 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 GPR27Q9NS67 375 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 SALL4Q9UJQ4 1053 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 REXO2Q9Y3B8 237 aaKnown RBP15.48■□□□□ 0.07
CPSF1-210ENST00000532935 PCDHGC4Q9Y5F7 938 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 CHD8Q9HCK8 2581 aa15.48■□□□□ 0.07
CPSF1-210ENST00000532935 PTPRBP23467 1997 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 A0A1W2PQ67 120 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 RCCD1A6NED2 376 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 APOL1O14791 398 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 ITGAVP06756 1048 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 C6P13671 934 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 ZFXP17010 805 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-210ENST00000532935 IGFALSP35858 605 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 RABIFP47224 123 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 SEMG2Q02383 582 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 CCDC173Q0VFZ6 552 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 FOXC1Q12948 553 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 BNIP3Q12983 259 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 MFSD7Q6UXD7 560 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 RFX6Q8HWS3 928 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 TMEM139Q8IV31 216 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 CCNYQ8ND76 341 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 ACRBPQ8NEB7 543 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 SPOCK2Q92563 424 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 POLR1EQ9GZS1 481 aaKnown RBP15.47■□□□□ 0.07
CPSF1-210ENST00000532935 RBM22Q9NW64 420 aaKnown RBP eCLIP15.47■□□□□ 0.07
CPSF1-210ENST00000532935 COQ6Q9Y2Z9 468 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 HEY1Q9Y5J3 304 aa15.47■□□□□ 0.07
CPSF1-210ENST00000532935 CPP00450 1065 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 FTH1P19P0C7X4 201 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 CCNB1P14635 433 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 LIG3P49916 1009 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 PFN3P60673 137 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 PPIDQ08752 370 aaKnown RBP15.46■□□□□ 0.07
CPSF1-210ENST00000532935 ITKQ08881 620 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 TRAF2Q12933 501 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 RALGDSQ12967 914 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 TAZQ16635 292 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 KDM7AQ6ZMT4 941 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 DPPA4Q7L190 304 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 KANSL1Q7Z3B3 1105 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 DAAM2Q86T65 1068 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 CCDC13Q8IYE1 715 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 TP53I13Q8NBR0 393 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-210ENST00000532935 TPCN2Q8NHX9 752 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 PDCD6IPQ8WUM4 868 aaKnown RBP15.46■□□□□ 0.07
CPSF1-210ENST00000532935 IFT43Q96FT9 208 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 CALR3Q96L12 384 aaKnown RBP15.46■□□□□ 0.07
CPSF1-210ENST00000532935 LGMNQ99538 433 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 SEMA3CQ99985 751 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 MBNL1Q9NR56 388 aaKnown RBP15.46■□□□□ 0.07
CPSF1-210ENST00000532935 HAUS2Q9NVX0 235 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 AMACRQ9UHK6 382 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 ANGPTL2Q9UKU9 493 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 TTLL3Q9Y4R7 772 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 LRP4O75096 1905 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 AKAP13Q12802 2813 aa15.46■□□□□ 0.07
CPSF1-210ENST00000532935 SPTY2D1-AS1A0A0U1RR47 76 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 CFAP69A5D8W1 941 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 BTNL10A8MVZ5 291 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 LZTS3O60299 673 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-210ENST00000532935 SDC3O75056 442 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 NEBLO76041 1014 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 ELFN1P0C7U0 828 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 CDKN2BP42772 138 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 VAV2P52735 878 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 DYNLT1P63172 113 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 SHC2P98077 582 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 PDE1CQ14123 709 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-210ENST00000532935 FZD2Q14332 565 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 LRRC14Q15048 493 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 AGERQ15109 404 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 IRF4Q15306 451 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 ALG1LQ6GMV1 187 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 NPNTQ6UXI9 565 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 KATNAL2Q8IYT4 538 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 EID2Q8N6I1 236 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 LACRTQ9GZZ8 138 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 B4GALT6Q9UBX8 382 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 FTSJ1Q9UET6 329 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 WASF3Q9UPY6 502 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 DUSP10Q9Y6W6 482 aa15.45■□□□□ 0.06
CPSF1-210ENST00000532935 FRYQ5TBA9 3013 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 GOLGA4Q13439 2230 aaKnown RBP15.44■□□□□ 0.06
CPSF1-210ENST00000532935 A8MX80 341 aa15.44■□□□□ 0.06
CPSF1-210ENST00000532935 PJA2O43164 708 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms