RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 LINC00523Q86TU6 105 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 ZSWIM9Q86XI8 627 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 GPR161Q8N6U8 529 aaKnown RBP14.41□□□□□ -0.1
COL16A1-217ENST00000532877 MCUQ8NE86 351 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 TMIEQ8NEW7 156 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 PIP4K2CQ8TBX8 421 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 PDCD6IPQ8WUM4 868 aaKnown RBP14.41□□□□□ -0.1
COL16A1-217ENST00000532877 IFT81Q8WYA0 676 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 CLDN23Q96B33 292 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 SERPINB12Q96P63 405 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 FAM129AQ9BZQ8 928 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 NEUROG2Q9H2A3 272 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 MFSD1Q9H3U5 465 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 SUV39H2Q9H5I1 410 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 POLR3BQ9NW08 1133 aaPredicted RBP14.41□□□□□ -0.1
COL16A1-217ENST00000532877 SARDHQ9UL12 918 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 PCDHB9Q9Y5E1 797 aa14.41□□□□□ -0.1
COL16A1-217ENST00000532877 MAP1BP46821 2468 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 GPR179Q6PRD1 2367 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 TSPAN11A1L157 253 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 C1QTNF3-AMACRE9PGA6 284 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 KPNA3O00505 521 aaPredicted RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 CTIFO43310 598 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 NDST3O95803 873 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 CPP00450 1065 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 IL1BP01584 269 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 EPOP01588 193 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 HLA-DPA1P20036 260 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 TNNT3P45378 269 aaPredicted RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 RPS9P46781 194 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 METAP1P53582 386 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 SATB1Q01826 763 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 SLC1A5Q15758 541 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 CRY1Q16526 586 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 POM121L1PQ3SYA9 428 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 ZNF805Q5CZA5 627 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 SIRPB2Q5JXA9 342 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 ZNF776Q68DI1 518 aaPredicted RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 DENND5AQ6IQ26 1287 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 RANBP10Q6VN20 620 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 PPP1R21Q6ZMI0 780 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 SYT13Q7L8C5 426 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 CACUL1Q86Y37 369 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 MMAAQ8IVH4 418 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 ZCCHC9Q8N567 271 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 SLC25A41Q8N5S1 370 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 LPCAT1Q8NF37 534 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 FLCNQ8NFG4 579 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 OR52K1Q8NGK4 314 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 KLHL32Q96NJ5 620 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 MKRN2Q9H000 416 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 CHRDQ9H2X0 955 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 XAB2Q9HCS7 855 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 CASS4Q9NQ75 786 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 PIH1D1Q9NWS0 290 aaKnown RBP14.4□□□□□ -0.1
COL16A1-217ENST00000532877 SIT1Q9Y3P8 196 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 MYLKQ15746 1914 aa14.4□□□□□ -0.1
COL16A1-217ENST00000532877 PI15O43692 258 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 RNASEH1O60930 286 aaKnown RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 ATG13O75143 517 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 KRT37O76014 449 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 FGF1P05230 155 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 MLNP12872 115 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 AOC1P19801 751 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 ITGB7P26010 798 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 MAGEA3P43357 314 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 RPL26P61254 145 aaKnown RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 VSNL1P62760 191 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 SARNPP82979 210 aaKnown RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 CDH17Q12864 832 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 MTM1Q13496 603 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 CST6Q15828 149 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 WDR93Q6P2C0 686 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 LRRC8BQ6P9F7 803 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 BRAT1Q6PJG6 821 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 PARS2Q7L3T8 475 aaKnown RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 CAND1Q86VP6 1230 aaKnown RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 GSPT2Q8IYD1 628 aaKnown RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 PAF1Q8N7H5 531 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 PIH1D2Q8WWB5 315 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 ARRDC3Q96B67 414 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 PPP1R16AQ96I34 528 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 PWWP2AQ96N64 755 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 ADGRE3Q9BY15 652 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 FRMD8Q9BZ67 464 aaPredicted RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 SLC6A17Q9H1V8 727 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 ARNT2Q9HBZ2 717 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 C2orf42Q9NWW7 574 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 DKK3Q9UBP4 350 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 NFU1Q9UMS0 254 aa14.39□□□□□ -0.11
COL16A1-217ENST00000532877 RPL26L1Q9UNX3 145 aaKnown RBP14.39□□□□□ -0.11
COL16A1-217ENST00000532877 A0A1W2PQ67 120 aa14.38□□□□□ -0.11
COL16A1-217ENST00000532877 TCRBV21S2A2A0A5A6 115 aa14.38□□□□□ -0.11
COL16A1-217ENST00000532877 C16orf96A6NNT2 1141 aa14.38□□□□□ -0.11
COL16A1-217ENST00000532877 MID1O15344 667 aa14.38□□□□□ -0.11
COL16A1-217ENST00000532877 PPFIA2O75334 1257 aa14.38□□□□□ -0.11
COL16A1-217ENST00000532877 AVILO75366 819 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms