RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 CCDC22O60826 627 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 KRT34O76011 436 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 GOT2P00505 430 aaKnown RBP13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 CD1EP15812 388 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 CDKN2DP55273 166 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 SEMA3AQ14563 771 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 ARL13AQ5H913 290 aaPredicted RBP13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 EFHBQ8N7U6 833 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 MAB21L3Q8N8X9 362 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 TDRD5Q8NAT2 981 aaKnown RBP13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 NAT14Q8WUY8 206 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 INPP5DQ92835 1189 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 EXT2Q93063 718 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 CLPTM1LQ96KA5 538 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 TOX2Q96NM4 488 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 BTBD10Q9BSF8 475 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 ZBED2Q9BTP6 218 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 MAGEH1Q9H213 219 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 GPAMQ9HCL2 828 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 BPIFA1Q9NP55 256 aa13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.48□□□□□ -0.25
CAPRIN1-212ENST00000532820 CCDC162PA2VCL2 907 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 TMEM233B4DJY2 109 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 ZMPSTE24O75844 475 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 HDCP19113 662 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 WDR5P61964 334 aaKnown RBP13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 MXRA7P84157 204 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 WFDC5Q8TCV5 224 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 MCUR1Q96AQ8 359 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 PHF21BQ96EK2 531 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 GPR78Q96P69 363 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 TACO1Q9BSH4 297 aaKnown RBP13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 DOCK6Q96HP0 2047 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 MROH6A6NGR9 719 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 PIGNO95427 931 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 HNRNPLP14866 589 aaKnown RBP eCLIP13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 TUBB3Q13509 450 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 HS6ST3Q8IZP7 471 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 LPCAT1Q8NF37 534 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 KLF16Q9BXK1 252 aaPredicted RBP13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 DENND2DQ9H6A0 471 aaPredicted RBP13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 MRM3Q9HC36 420 aaKnown RBP13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 SEPT3Q9UH03 358 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 PCDHB12Q9Y5F1 795 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 INSL5Q9Y5Q6 135 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 CPQQ9Y646 472 aa13.47□□□□□ -0.25
CAPRIN1-212ENST00000532820 GOLGA8CPA6NN73 597 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 CAPN14A8MX76 684 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 K7ERQ8 282 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 CLDN11O75508 207 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 MT-CO1P00395 513 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 RAG1P15918 1043 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 TSPAN8P19075 237 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 KCNA5P22460 613 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 CALB2P22676 271 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 ABL2P42684 1182 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 GPR158Q5T848 1215 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 HECTD2Q5U5R9 776 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 TPGS1Q6ZTW0 290 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 FAM96AQ9H5X1 160 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 MRPL17Q9NRX2 175 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 FCF1Q9Y324 198 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 XIRP2A4UGR9 3374 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 ZNF195O14628 629 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 GSC2O15499 205 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 GPR39O43194 453 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 KLHL2O95198 593 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 CDKN1CP49918 316 aaPredicted RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 EPHB3P54753 998 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 CYTH1Q15438 398 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 ATXN7L2Q5T6C5 722 aaPredicted RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 CXorf57Q6NSI4 855 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 ZYG11AQ6WRX3 759 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 TEX9Q8N6V9 391 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 TXNDC5Q8NBS9 432 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 RBM15BQ8NDT2 890 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 OR52B2Q96RD2 323 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 NUF2Q9BZD4 464 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 TM6SF2Q9BZW4 377 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 NKX1-2Q9UD57 310 aaPredicted RBP13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 ZDHHC2Q9UIJ5 367 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
CAPRIN1-212ENST00000532820 UBA6A0AVT1 1052 aaPredicted RBP13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 CHUKO15111 745 aa13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 DCXO43602 365 aa13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 KDELR3O43731 214 aa13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 SIN3BO75182 1162 aa13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 S1PR4O95977 384 aa13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 GABRR2P28476 465 aa13.46□□□□□ -0.26
CAPRIN1-212ENST00000532820 EPHA3P29320 983 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms