RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PTGR2Q8N8N7 351 aaPredicted RBP14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 ITFG1Q8TB96 612 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 SLC24A3Q9HC58 644 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 PHPT1Q9NRX4 125 aaPredicted RBP14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 FZD9O00144 591 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM20BO75063 409 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 KCNH1O95259 989 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 HNF4AP41235 474 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 TXNDC11Q6PKC3 985 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 POTEHQ6S545 545 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 C12orf56Q8IXR9 622 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 TSEN2Q8NCE0 465 aaKnown RBP14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 CLIP3Q96DZ5 547 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 BTN2A3PQ96KV6 586 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 CORO2BQ9UQ03 480 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 IGKV6D-41A0A0C4DH26 115 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 PIK3R1P27986 724 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 TSNQ15631 228 aaKnown RBP14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 CCDC167Q9P0B6 97 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 MRPS17Q9Y2R5 130 aaKnown RBP14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 CA12O43570 354 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 STX11O75558 287 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 CCNDBP1O95273 360 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TAF13Q15543 124 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 POU5F2Q8N7G0 328 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 C1orf127Q8N9H9 656 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 RNF145Q96MT1 663 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 FERD3LQ96RJ6 166 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 SERHL2Q9H4I8 314 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 SERHLQ9NQF3 203 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 ARMCX1Q9P291 453 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 CHURC1-FNTBB4DL54 471 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 SLC25A14O95258 325 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 LMO2P25791 158 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 CTBP1Q13363 440 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 AP5B1Q2VPB7 878 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 PTPN20Q4JDL3 420 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 FUT10Q6P4F1 479 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 C11orf88Q6PI97 169 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 RNF148Q8N7C7 305 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 MCRS1Q96EZ8 462 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 VPS45Q9NRW7 570 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 SLC12A4Q9UP95 1085 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TPRKBQ9Y3C4 175 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 FFAR3O14843 346 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 GPR42O15529 346 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 B4GALT4O60513 344 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 SCTRP47872 440 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 SLC30A9Q6PML9 568 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 RHOBTB2Q9BYZ6 727 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 MMADHCQ9H3L0 296 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 REEP1Q9H902 201 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3DA0A087WVF3 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3IA0A087WXS9 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3EA0A087X179 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3KA0A087X1G2 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3FA6NER0 549 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3LB9A6J9 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3HP0C7X1 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 ITGA1P56199 1179 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3GQ6DHY5 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3CQ6IPX1 549 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 PSRC1Q6PGN9 363 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 TBC1D3Q8IZP1 549 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 C2orf73Q8N5S3 287 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 KLHL23Q8NBE8 558 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 ACMSDQ8TDX5 336 aa14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 KCTD15Q96SI1 283 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 WRAP73Q9P2S5 460 aaPredicted RBP14.85□□□□□ -0.03
PCDHA9-202ENST00000532602 OTCP00480 354 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ITGAVP06756 1048 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ICAM3P32942 547 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ELP6Q0PNE2 266 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 OTOP3Q7RTS5 596 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 SNX32Q86XE0 403 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 TNKS2Q9H2K2 1166 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 INTS7Q9NVH2 962 aaKnown RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PRKAG1P54619 331 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 SLC25A52Q3SY17 297 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 NEK5Q6P3R8 708 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 STRADAQ7RTN6 431 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 AADATQ8N5Z0 425 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 OR10G6Q8NH81 332 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PALMDQ9NP74 551 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 ASF1AQ9Y294 204 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PCDHB9Q9Y5E1 797 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 TRIM24O15164 1050 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PRMT3O60678 531 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 KRT75O95678 551 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 OASLQ15646 514 aaKnown RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 INAQ16352 499 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 SCIMPQ6UWF3 145 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 PIWIL4Q7Z3Z4 852 aaKnown RBP14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 GPR135Q8IZ08 494 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 KIF13AQ9H1H9 1805 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 CENPXA8MT69 81 aa14.84□□□□□ -0.03
PCDHA9-202ENST00000532602 SLC28A1O00337 649 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms