RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CCDC134Q9H6E4 229 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 PLEKHG2Q9H7P9 1386 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 TBC1D13Q9NVG8 400 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 FAM118AQ9NWS6 357 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 ERAP1Q9NZ08 941 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 CRNNQ9UBG3 495 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 XPR1Q9UBH6 696 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 ANGPTL2Q9UKU9 493 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 PCDHA10Q9Y5I2 948 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 C15orf38-AP3S2A0A0A6YYH1 394 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 EDDM13A0A1B0GTR0 161 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 GOLGA8OA6NCC3 632 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 GOLGA8NF8WBI6 632 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 NFIBO00712 420 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 GCATO75600 419 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 OR6B1O95007 311 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 FUCA1P04066 466 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 CKMT2P17540 419 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 ACTR3P61158 418 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 NOP14P78316 857 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 EFNB1P98172 346 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 GAD2Q05329 585 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 SRSF11Q05519 484 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 LCP2Q13094 533 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 KCNA10Q16322 511 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 KRT79Q5XKE5 535 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 STEAP3Q658P3 488 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 SLC9A4Q6AI14 798 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 CYP2R1Q6VVX0 501 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 ZNF410Q86VK4 478 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 SLC43A2Q8N370 569 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 BHLHE23Q8NDY6 225 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 RNASE8Q8TDE3 154 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 CLEC4DQ8WXI8 215 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 NSMCE2Q96MF7 247 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 SSX3Q99909 188 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 LLPHQ9BRT6 129 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 IKZF4Q9H2S9 585 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 HRH4Q9H3N8 390 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 GSX1Q9H4S2 264 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 KCNK13Q9HB14 408 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 MTRF1LQ9UGC7 380 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 VPS51Q9UID3 782 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 CD207Q9UJ71 328 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 ACTL7AQ9Y615 435 aa5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 COPG1Q9Y678 874 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-222ENST00000531967 PHLPP2Q6ZVD8 1323 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 A0A087WZY1 265 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 GOLGA8SH3BPF8 625 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 LILRB5O75023 590 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 USP12O75317 370 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 DGAT1O75907 488 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 SERPING1P05155 500 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 ENO1P06733 434 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 VIMP08670 466 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 VCLP18206 1134 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 ACHEP22303 614 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 FRKP42685 505 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 CAMPP49913 170 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 MFAP3P55082 362 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 MAP3K7CLP57077 242 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 PCBP4P57723 403 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 CBX1P83916 185 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 SOX4Q06945 474 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 SNTB2Q13425 540 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 OLIG2Q13516 323 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 EMC4Q5J8M3 183 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 FAM171A1Q5VUB5 890 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 FAM91A1Q658Y4 838 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 OR7E24Q6IFN5 339 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 DYMQ7RTS9 669 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 GPRIN1Q7Z2K8 1008 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 ERO1BQ86YB8 467 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 NAT16Q8N8M0 369 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 UXS1Q8NBZ7 420 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 GOLGA5Q8TBA6 731 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 NT5C3BQ969T7 300 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 C14orf79Q96F83 325 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 MISP3Q96FF7 219 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 MSANTD3Q96H12 275 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 ZNF558Q96NG5 402 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 NECTIN4Q96NY8 510 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 CLSTN3Q9BQT9 956 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 WDR83Q9BRX9 315 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 SOX7Q9BT81 388 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 PINK1Q9BXM7 581 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 RAB17Q9H0T7 212 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 EXO5Q9H790 373 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 AKIRIN1Q9H9L7 192 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 BCO1Q9HAY6 547 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 TMEM165Q9HC07 324 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 LANCL2Q9NS86 450 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 HAO2Q9NYQ3 351 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 SPATA31A3Q5VYP0 1347 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 TRBV2A0A0J9YWF9 115 aa5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 SLC16A3O15427 465 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-222ENST00000531967 ST8SIA3O43173 380 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms