RNA–Protein interactions for RNA: ENST00000531018.5

SYVN1-213, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-213ENST00000531018 HES6Q96HZ4 224 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 RBM41Q96IZ5 413 aaKnown RBP9.28□□□□□ -0.92
SYVN1-213ENST00000531018 SERAC1Q96JX3 654 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 BMFQ96LC9 184 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 MCCC1Q96RQ3 725 aaPredicted RBP9.28□□□□□ -0.92
SYVN1-213ENST00000531018 MAK16Q9BXY0 300 aaKnown RBP9.28□□□□□ -0.92
SYVN1-213ENST00000531018 PCDH12Q9NPG4 1184 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 RBM22Q9NW64 420 aaKnown RBP eCLIP9.28□□□□□ -0.92
SYVN1-213ENST00000531018 ITM2BQ9Y287 266 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
SYVN1-213ENST00000531018 PCDHGB2Q9Y5G2 931 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 SNX11Q9Y5W9 270 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 HS3ST3A1Q9Y663 406 aa9.28□□□□□ -0.92
SYVN1-213ENST00000531018 COL5A1P20908 1838 aaPredicted RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 IGLON5A6NGN9 336 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 RAD51BO15315 384 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 SLC31A1O15431 190 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 DDX3YO15523 660 aaKnown RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PCDHGA12O60330 932 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 DFNA5O60443 496 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 CST8O60676 142 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PCDH8O95206 1070 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PGLSO95336 258 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PAK4O96013 591 aaPredicted RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PYGMP11217 842 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PECAM1P16284 738 aaPredicted RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PRLRP16471 622 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 GM2AP17900 193 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 CSRP1P21291 193 aaKnown RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 TGM2P21980 687 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 HNRNPA2B1P22626 353 aaKnown RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 RXRGP48443 463 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 MAXP61244 160 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 POLR2LP62875 67 aaKnown RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 TRAF2Q12933 501 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 SHBQ15464 509 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 ZFYVE27Q5T4F4 411 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 LAYNQ6UX15 382 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 NPNTQ6UXI9 565 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 GCNT7Q6ZNI0 430 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 BZW1Q7L1Q6 419 aaKnown RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 SYCE1Q8N0S2 351 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 BBS5Q8N3I7 341 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 DENND6BQ8NEG7 585 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 LRRN4Q8WUT4 740 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 NSMCE1Q8WV22 266 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PIH1D2Q8WWB5 315 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 SEMA3CQ99985 751 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 POLR1EQ9GZS1 481 aaKnown RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 IL21RQ9HBE5 538 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 NT5MQ9NPB1 228 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 SAE1Q9UBE0 346 aaPredicted RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 FNDC3AQ9Y2H6 1198 aaKnown RBP9.27□□□□□ -0.93
SYVN1-213ENST00000531018 PCDHGC4Q9Y5F7 938 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 HEY1Q9Y5J3 304 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 CAPN6Q9Y6Q1 641 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 FREM2Q5SZK8 3169 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 LRP4O75096 1905 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 KNTC1P50748 2209 aa9.27□□□□□ -0.93
SYVN1-213ENST00000531018 A0A1B0GTQ1 180 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 MACROD2A1Z1Q3 448 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 GOLGA6L3A6NEY3 463 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 POM121BA6NF01 834 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 MIF4GDA9UHW6 222 aaKnown RBP9.26□□□□□ -0.93
SYVN1-213ENST00000531018 H0Y8X5 98 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 APOC4-APOC2K7ER74 178 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 KCNK1O00180 336 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 PPP1R12AO14974 1030 aaPredicted RBP9.26□□□□□ -0.93
SYVN1-213ENST00000531018 MMP20O60882 483 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 CBFA2T3O75081 653 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 CER1O95813 267 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 PRLP01236 227 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 JCHAINP01591 159 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 APOC2P02655 101 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 HLA-DQB2P05538 268 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 TNNT1P13805 278 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 AKT2P31751 481 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 RWDD2BP57060 319 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 PFN3P60673 137 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 ELP6Q0PNE2 266 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 WASHC5Q12768 1159 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 ZBTB17Q13105 803 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 XRCC4Q13426 336 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 SLC14A2Q15849 920 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 LRRC73Q5JTD7 316 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 PSAPL1Q6NUJ1 521 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 KYAT3Q6YP21 454 aaKnown RBP9.26□□□□□ -0.93
SYVN1-213ENST00000531018 DPPA4Q7L190 304 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 KANSL1Q7Z3B3 1105 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 PEX26Q7Z412 305 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 RFX6Q8HWS3 928 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 SLC22A18ASQ8N1D0 253 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 TP53I13Q8NBR0 393 aaPredicted RBP9.26□□□□□ -0.93
SYVN1-213ENST00000531018 BAHD1Q8TBE0 780 aaPredicted RBP9.26□□□□□ -0.93
SYVN1-213ENST00000531018 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.26□□□□□ -0.93
SYVN1-213ENST00000531018 KLK6Q92876 244 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 SKA1Q96BD8 255 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 SCRN2Q96FV2 425 aa9.26□□□□□ -0.93
SYVN1-213ENST00000531018 IMP4Q96G21 291 aaKnown RBP9.26□□□□□ -0.93
SYVN1-213ENST00000531018 PDLIM2Q96JY6 352 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms