RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 A0A1B0GTQ1 180 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 BTNL10A8MVZ5 291 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 CCNB1P14635 433 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 IGFALSP35858 605 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 NUDT1P36639 197 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 MMP12P39900 470 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 NIPAL4Q0D2K0 466 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 BNIP3Q12983 259 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 SGCGQ13326 291 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 HNRNPDQ14103 355 aaKnown RBP18.85■□□□□ 0.61
GMDS-208ENST00000530927 TMEM52BQ4KMG9 183 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 BRAT1Q6PJG6 821 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 PTAR1Q7Z6K3 402 aaPredicted RBP18.85■□□□□ 0.61
GMDS-208ENST00000530927 LRRC8AQ8IWT6 810 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 KATNAL2Q8IYT4 538 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 PAF1Q8N7H5 531 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 HCAR2Q8TDS4 363 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 SETD7Q8WTS6 366 aaKnown RBP18.85■□□□□ 0.61
GMDS-208ENST00000530927 KLHDC7BQ96G42 594 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 OLFM3Q96PB7 478 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 HEMGNQ9BXL5 484 aa18.85■□□□□ 0.61
GMDS-208ENST00000530927 PACSIN2Q9UNF0 486 aaPredicted RBP18.85■□□□□ 0.61
GMDS-208ENST00000530927 hCG_1818297A0A087WSY0 165 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 HTRA2O43464 458 aaPredicted RBP18.84■□□□□ 0.61
GMDS-208ENST00000530927 CST8O60676 142 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 SDC3O75056 442 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 JCHAINP01591 159 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 PDHA1P08559 390 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 C6P13671 934 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 MX2P20592 715 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 CSRP1P21291 193 aaKnown RBP18.84■□□□□ 0.61
GMDS-208ENST00000530927 HSPA9P38646 679 aaKnown RBP18.84■□□□□ 0.61
GMDS-208ENST00000530927 LIG3P49916 1009 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 CCT8P50990 548 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 PPIDQ08752 370 aaKnown RBP18.84■□□□□ 0.61
GMDS-208ENST00000530927 AP1B1Q10567 949 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 SLC45A4Q5BKX6 768 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 ZNF542PQ5EBM4 170 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 TIGD7Q6NT04 549 aaPredicted RBP18.84■□□□□ 0.61
GMDS-208ENST00000530927 Q6ZSR6 202 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 ABI3BPQ7Z7G0 1075 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 VSIG1Q86XK7 387 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 LRRC49Q8IUZ0 686 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 CCDC50Q8IVM0 306 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 BBS5Q8N3I7 341 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 CNTD1Q8N815 330 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 CCDC112Q8NEF3 446 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 CENPTQ96BT3 561 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 SEPT10Q9P0V9 454 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 PCDHB9Q9Y5E1 797 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 NCOR2Q9Y618 2525 aa18.84■□□□□ 0.61
GMDS-208ENST00000530927 NRDCO43847 1150 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 TM7SF2O76062 418 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 CTNNA1P35221 906 aaKnown RBP18.83■□□□□ 0.61
GMDS-208ENST00000530927 SLC14A1Q13336 389 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 NYAP1Q6ZVC0 841 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 IQCHQ86VS3 1027 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 TP53I13Q8NBR0 393 aaPredicted RBP18.83■□□□□ 0.61
GMDS-208ENST00000530927 ARRDC2Q8TBH0 407 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 ALG3Q92685 438 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 SKA1Q96BD8 255 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 ZNF830Q96NB3 372 aaPredicted RBP18.83■□□□□ 0.61
GMDS-208ENST00000530927 B4GALT6Q9UBX8 382 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 PCOLCE2Q9UKZ9 415 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 RAI2Q9Y5P3 530 aa18.83■□□□□ 0.61
GMDS-208ENST00000530927 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
GMDS-208ENST00000530927 A6NNZ2 444 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 CBFA2T3O75081 653 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 ZRANB2O95218 330 aaKnown RBP eCLIP18.83■□□□□ 0.6
GMDS-208ENST00000530927 FTCDO95954 541 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 TOP3BO95985 862 aaKnown RBP18.83■□□□□ 0.6
GMDS-208ENST00000530927 CPP00450 1065 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 ZNF883P0CG24 379 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 CEACAM1P13688 526 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 CTPS1P17812 591 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 GM2AP17900 193 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 ELP6Q0PNE2 266 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 IRF4Q15306 451 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 TFDP3Q5H9I0 405 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 ERAP2Q6P179 960 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 DBX2Q6ZNG2 339 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 KIAA1524Q8TCG1 905 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 LENG8Q96PV6 779 aaPredicted RBP18.83■□□□□ 0.6
GMDS-208ENST00000530927 POLR1EQ9GZS1 481 aaKnown RBP18.83■□□□□ 0.6
GMDS-208ENST00000530927 C10orf88Q9H8K7 445 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 PCDHA3Q9Y5H8 950 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 ADGRG1Q9Y653 693 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 CAPN6Q9Y6Q1 641 aa18.83■□□□□ 0.6
GMDS-208ENST00000530927 SOCS5O75159 536 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 PGLSO95336 258 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 MMP2P08253 660 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 ALPIP09923 528 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 ZFXP17010 805 aaPredicted RBP18.82■□□□□ 0.6
GMDS-208ENST00000530927 PEX5P50542 639 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 SIM1P81133 766 aaPredicted RBP18.82■□□□□ 0.6
GMDS-208ENST00000530927 WSCD2Q2TBF2 565 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 ALG1LQ6GMV1 187 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 LIPIQ6XZB0 460 aa18.82■□□□□ 0.6
GMDS-208ENST00000530927 KYAT3Q6YP21 454 aaKnown RBP18.82■□□□□ 0.6
GMDS-208ENST00000530927 DPPA4Q7L190 304 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms