RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 ATP13A3Q9H7F0 1226 aa11.23□□□□□ -0.61
NR1H3-230ENST00000527949 NLGN3Q9NZ94 848 aa11.23□□□□□ -0.61
NR1H3-230ENST00000527949 NCKIPSDQ9NZQ3 722 aa11.23□□□□□ -0.61
NR1H3-230ENST00000527949 IFNKQ9P0W0 207 aa11.23□□□□□ -0.61
NR1H3-230ENST00000527949 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
NR1H3-230ENST00000527949 SEPT3Q9UH03 358 aa11.23□□□□□ -0.61
NR1H3-230ENST00000527949 IPO11Q9UI26 975 aaKnown RBP11.23□□□□□ -0.61
NR1H3-230ENST00000527949 CA5BQ9Y2D0 317 aa11.23□□□□□ -0.61
NR1H3-230ENST00000527949 SSU72P8A0A1W2PR75 194 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 ANKRD36A6QL64 1941 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 H3BM21 787 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 J3KR12 359 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 MYO1FO00160 1098 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 TPP1O14773 563 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SCAMP1O15126 338 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 CBFA2T2O43439 604 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 PALMO75781 387 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 MT-CO3P00414 261 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 GP1BAP07359 652 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 GIMD1P0DJR0 217 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 RARAP10276 462 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 ALPPL2P10696 532 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 C6P13671 934 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SERPINA4P29622 427 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SERPINB6P35237 376 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 MMP12P39900 470 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 CLDN2P57739 230 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 POLR2LP62875 67 aaKnown RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 INSM1Q01101 510 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SLC25A11Q02978 314 aaKnown RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 PTK2BQ14289 1009 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 PPP6R3Q5H9R7 873 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 LEKR1Q6ZMV7 388 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 PTAR1Q7Z6K3 402 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SRLQ86TD4 932 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SDR16C5Q8N3Y7 309 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 NPWQ8N729 165 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 CXorf40AQ8TE69 158 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SNRNP27Q8WVK2 155 aaKnown RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 BTN2A2Q8WVV5 523 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 FATE1Q969F0 183 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 CCDC97Q96F63 343 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 CELF6Q96J87 481 aaKnown RBP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 CSPG4P5Q96PW8 444 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 DEPDC7Q96QD5 511 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 DNAJC7Q99615 494 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.22□□□□□ -0.61
NR1H3-230ENST00000527949 CALN1Q9BXU9 219 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 THAP2Q9H0W7 228 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 SP110Q9HB58 689 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 FZD3Q9NPG1 666 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 KCTD5Q9NXV2 234 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 MYO1AQ9UBC5 1043 aa11.22□□□□□ -0.61
NR1H3-230ENST00000527949 LRRK1Q38SD2 2015 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 TRIM38O00635 465 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 INSIG1O15503 277 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 SIGLEC6O43699 453 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 BUB1BO60566 1050 aaPredicted RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 SOCS5O75159 536 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 CKMT1AP12532 417 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 CR2P20023 1033 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 XPAP23025 273 aaPredicted RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 CASP14P31944 242 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 IGFALSP35858 605 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 DUSP3P51452 185 aaPredicted RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 SLC18A3Q16572 532 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 HADHQ16836 314 aaKnown RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 ASTE1Q2TB18 679 aaPredicted RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 SPECC1LQ69YQ0 1117 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 ERAP2Q6P179 960 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 PCSK4Q6UW60 755 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 TMCO3Q6UWJ1 677 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 MACC1Q6ZN28 852 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 TP53I13Q8NBR0 393 aaPredicted RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 TSEN2Q8NCE0 465 aaKnown RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 OR8K1Q8NGG5 319 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 HIC2Q96JB3 615 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 MYOCQ99972 504 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 NUP85Q9BW27 656 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 CINPQ9BW66 212 aaPredicted RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 XPO4Q9C0E2 1151 aaKnown RBP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 PCDH18Q9HCL0 1135 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 THSD1Q9NS62 852 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.21□□□□□ -0.61
NR1H3-230ENST00000527949 AMACRQ9UHK6 382 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 GGT7Q9UJ14 662 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 SALL4Q9UJQ4 1053 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 ANAPC7Q9UJX3 599 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 ITM2BQ9Y287 266 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 ATP8A1Q9Y2Q0 1164 aa11.21□□□□□ -0.61
NR1H3-230ENST00000527949 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.62
NR1H3-230ENST00000527949 BPTFQ12830 3046 aa11.21□□□□□ -0.62
NR1H3-230ENST00000527949 ZNF462Q96JM2 2506 aa11.2□□□□□ -0.62
NR1H3-230ENST00000527949 ZNF487B1APH4 448 aa11.2□□□□□ -0.62
NR1H3-230ENST00000527949 TRAFD1O14545 582 aaPredicted RBP11.2□□□□□ -0.62
NR1H3-230ENST00000527949 ARHGAP6O43182 974 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms