RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SMAD1Q15797 465 aaKnown RBP33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 ANKRD20A8PQ5CZ79 823 aa33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 MARC1Q5VT66 337 aa33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 DNAJC28Q9NX36 388 aa33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 ZNF487B1APH4 448 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 H3BM21 787 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 HTRA2O43464 458 aaPredicted RBP33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 MFSD11O43934 449 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 C6P13671 934 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 CKMT2P17540 419 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 GARSP41250 739 aaKnown RBP33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 ILKQ13418 452 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 PTK2BQ14289 1009 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 PROX2Q3B8N5 592 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 PGBD5Q8N414 524 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 TEX26Q8N6G2 289 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 UCKL1Q9NWZ5 548 aa33.27■■■□□ 2.92
SSSCA1-205ENST00000527920 NEMP2A6NFY4 417 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 RFPL3O75679 317 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 MMP13P45452 471 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 LIG3P49916 1009 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 MESDQ14696 234 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 LRRC14Q15048 493 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 HS1BP3Q53T59 392 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 VSIG1Q86XK7 387 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 NSMCE3Q96MG7 304 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 MBNL1Q9NR56 388 aaKnown RBP33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 CSNK1G3Q9Y6M4 447 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 AKAP13Q12802 2813 aa33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 KMT2BQ9UMN6 2715 aaPredicted RBP33.26■■■□□ 2.91
SSSCA1-205ENST00000527920 TRIM38O00635 465 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 THOP1P52888 689 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 IRF4Q15306 451 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 TPRG1LQ5T0D9 272 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 TC2NQ8N9U0 490 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 TSGA13Q96PP4 275 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 SCUBE2Q9NQ36 999 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 NLGN3Q9NZ94 848 aa33.25■■■□□ 2.91
SSSCA1-205ENST00000527920 ASPMQ8IZT6 3477 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 SCAMP1O15126 338 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 SIGLEC6O43699 453 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 GIMD1P0DJR0 217 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 ALPPL2P10696 532 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 PEX5P50542 639 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 RALGDSQ12967 914 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 DNAJC3Q13217 504 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 WSCD2Q2TBF2 565 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 LRRC38Q5VT99 294 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 TIGD7Q6NT04 549 aaPredicted RBP33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 DPPA4Q7L190 304 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 MAML1Q92585 1016 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 TBATAQ96M53 351 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 NOD2Q9HC29 1040 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 AMACRQ9UHK6 382 aa33.24■■■□□ 2.91
SSSCA1-205ENST00000527920 TMEM110-MUSTN1A8MSY1 372 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 MX2P20592 715 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 KDELR1P24390 212 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 ACP1P24666 158 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 EIF2B5Q13144 721 aaKnown RBP33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 IFI16Q16666 785 aaKnown RBP33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 ZNF542PQ5EBM4 170 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 DHRS13Q6UX07 377 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 MACC1Q6ZN28 852 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 PQLC3Q8N755 202 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 PAF1Q8N7H5 531 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 ZNF548Q8NEK5 533 aaPredicted RBP33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 BTN2A2Q8WVV5 523 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 DUSP23Q9BVJ7 150 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 COQ6Q9Y2Z9 468 aa33.23■■■□□ 2.91
SSSCA1-205ENST00000527920 CCNCP24863 283 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 NFKBIAP25963 317 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 ALG1LQ6GMV1 187 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 LIPIQ6XZB0 460 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 KDM7AQ6ZMT4 941 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 TMPRSS12Q86WS5 348 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 FAM181AQ8N9Y4 354 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 RAPGEF5Q92565 580 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 ANP32EQ9BTT0 268 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 KLF15Q9UIH9 416 aa33.22■■■□□ 2.91
SSSCA1-205ENST00000527920 MATN3O15232 486 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 LZTS3O60299 673 aaPredicted RBP33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 PRKCGP05129 697 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 JUNDP17535 347 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 SLC1A1P43005 524 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 CCDC157Q569K6 752 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 RNF157Q96PX1 679 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 HAUS2Q9NVX0 235 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 PCDHGC4Q9Y5F7 938 aa33.21■■■□□ 2.91
SSSCA1-205ENST00000527920 ELFN1P0C7U0 828 aa33.2■■■□□ 2.91
SSSCA1-205ENST00000527920 MTM1Q13496 603 aa33.2■■■□□ 2.91
SSSCA1-205ENST00000527920 ZFYVE27Q5T4F4 411 aa33.2■■■□□ 2.91
SSSCA1-205ENST00000527920 MRFAP1L1Q96HT8 127 aa33.2■■■□□ 2.91
SSSCA1-205ENST00000527920 POLR1EQ9GZS1 481 aaKnown RBP33.2■■■□□ 2.91
SSSCA1-205ENST00000527920 USP29Q9HBJ7 922 aa33.2■■■□□ 2.91
SSSCA1-205ENST00000527920 PTPRBP23467 1997 aa33.2■■■□□ 2.9
SSSCA1-205ENST00000527920 TTC24A2A3L6 582 aaPredicted RBP33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 LRRD1A4D1F6 860 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 FFAR2O15552 330 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 LCA5LO95447 670 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 CPP00450 1065 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms