RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SCNN1BP51168 640 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 TAS2R40P59535 323 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 HNRNPKP61978 463 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 DAB2P98082 770 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 ELP6Q0PNE2 266 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 IHHQ14623 411 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 RFTN1Q14699 578 aaPredicted RBP10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 LBRQ14739 615 aaKnown RBP10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 GRM3Q14832 879 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 PTPRRQ15256 657 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 DEFB133Q30KQ1 61 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 TMCO4Q5TGY1 634 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 CDCP2Q5VXM1 449 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 BRAT1Q6PJG6 821 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 C19orf48Q6RUI8 117 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 TMCO3Q6UWJ1 677 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 PHACTR4Q8IZ21 702 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 PELI3Q8N2H9 469 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 LZTR1Q8N653 840 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 FAM181AQ8N9Y4 354 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 PLA2G15Q8NCC3 412 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 LMX1AQ8TE12 382 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 IQCDQ96DY2 449 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 ZNF599Q96NL3 588 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 CLPBQ9H078 707 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 ATP13A3Q9H7F0 1226 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 SEPT3Q9UH03 358 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 CSNK1G3Q9Y6M4 447 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 WDFY3Q8IZQ1 3526 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 CACNA1GO43497 2377 aa10.51□□□□□ -0.73
PRPF40B-204ENST00000527253 RP1P56715 2156 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 NEMP2A6NFY4 417 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 A8MX80 341 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 MYO1FO00160 1098 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 AQP9O43315 295 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 HTRA2O43464 458 aaPredicted RBP10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 PROSCO94903 275 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 MT-CO3P00414 261 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 SERPINA4P29622 427 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 CDH6P55285 790 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 MAXP61244 160 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 YPEL5P62699 121 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 BCL2L1Q07817 233 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 INPP5AQ14642 412 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 LRRC14Q15048 493 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 AGERQ15109 404 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 ALG11Q2TAA5 492 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 ERAP2Q6P179 960 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 LIPIQ6XZB0 460 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 MACC1Q6ZN28 852 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 DPPA4Q7L190 304 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 DCBLD1Q8N8Z6 715 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 PCDH19Q8TAB3 1148 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 ZNF564Q8TBZ8 553 aaPredicted RBP10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 TSACCQ96A04 125 aaPredicted RBP10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 DNAJC7Q99615 494 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 CHP1Q99653 195 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 LRRC61Q9BV99 259 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 NOD2Q9HC29 1040 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 OR1A2Q9Y585 309 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 PCDHGC4Q9Y5F7 938 aa10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.73
PRPF40B-204ENST00000527253 CFAP69A5D8W1 941 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 H3BM21 787 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 TOR1BO14657 336 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 TPP1O14773 563 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 YY2O15391 372 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 LZTS3O60299 673 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 OPA1O60313 960 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 RECQL5O94762 991 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 PCCBP05166 539 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 ALPPL2P10696 532 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 TSHRP16473 764 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 PTMSP20962 102 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 HNF1BP35680 557 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 RENBPP51606 427 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 THOP1P52888 689 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 AP1S1P61966 158 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 E2F1Q01094 437 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 TRAF2Q12933 501 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 DPYSL3Q14195 570 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 PTK2BQ14289 1009 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 KRT81Q14533 505 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 SLC18A3Q16572 532 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 CDKN3Q16667 212 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 SKOR2Q2VWA4 1001 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 PRRT3Q5FWE3 981 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 CFAP58Q5T655 872 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 NCBP2-AS2Q69YL0 99 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 SPECC1LQ69YQ0 1117 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 GUSBP11Q6P575 273 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 VSTM4Q8IW00 320 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 CACTIN-AS1Q8N1I8 211 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 CBARPQ8N350 705 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 TEX26Q8N6G2 289 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 PQLC3Q8N755 202 aa10.49□□□□□ -0.73
PRPF40B-204ENST00000527253 OR8K1Q8NGG5 319 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms