RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 MAP1BP46821 2468 aaKnown RBP16.35■□□□□ 0.21
BEST1-205ENST00000526988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
BEST1-205ENST00000526988 A8MX80 341 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 AKR1B15C9JRZ8 316 aaPredicted RBP16.35■□□□□ 0.21
BEST1-205ENST00000526988 SCAMP1O15126 338 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 PEX11BO96011 259 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 KRT7P08729 469 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 MMP12P39900 470 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 MMP13P45452 471 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 ARSEP51690 589 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 EIF2B5Q13144 721 aaKnown RBP16.35■□□□□ 0.21
BEST1-205ENST00000526988 PDK2Q15119 407 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 FAXCQ5TGI0 409 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 MARC1Q5VT66 337 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 TMPRSS12Q86WS5 348 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 MAP7D3Q8IWC1 876 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 PGBD5Q8N414 524 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 ZNF548Q8NEK5 533 aaPredicted RBP16.35■□□□□ 0.21
BEST1-205ENST00000526988 FAM71BQ8TC56 605 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 ECHDC3Q96DC8 303 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 NSMCE3Q96MG7 304 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 NUDCD1Q96RS6 583 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 CCDC86Q9H6F5 360 aaKnown RBP16.35■□□□□ 0.21
BEST1-205ENST00000526988 NOD2Q9HC29 1040 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 NLGN3Q9NZ94 848 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 KLF15Q9UIH9 416 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 PCDHGC4Q9Y5F7 938 aa16.35■□□□□ 0.21
BEST1-205ENST00000526988 CEP295Q9C0D2 2601 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 TRABD2BA6NFA1 517 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 K7ESM1 405 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 AQP9O43315 295 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 MFSD11O43934 449 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 MAP3K6O95382 1288 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 PCCBP05166 539 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 GIMD1P0DJR0 217 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 MYF5P13349 255 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 ACP1P24666 158 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 HNF1BP35680 557 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 MAXP61244 160 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 ITKQ08881 620 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 ILKQ13418 452 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 INPP5AQ14642 412 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 ANKRD20A8PQ5CZ79 823 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 CNGA4Q8IV77 575 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 PCDH19Q8TAB3 1148 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 SLC35G2Q8TBE7 412 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 BTN2A2Q8WVV5 523 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 DUSP23Q9BVJ7 150 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 SLC13A1Q9BZW2 595 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 NT5MQ9NPB1 228 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 SPASTQ9UBP0 616 aa16.34■□□□□ 0.21
BEST1-205ENST00000526988 TP53BP1Q12888 1972 aaPredicted RBP16.34■□□□□ 0.21
BEST1-205ENST00000526988 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
BEST1-205ENST00000526988 TOR1BO14657 336 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 ELFN1P0C7U0 828 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 PPARDQ03181 441 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 RALGDSQ12967 914 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 C1orf61Q13536 156 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 PAFAH1B3Q15102 231 aaKnown RBP16.33■□□□□ 0.2
BEST1-205ENST00000526988 DEFB133Q30KQ1 61 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 HES3Q5TGS1 186 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 NCBP2-AS2Q69YL0 99 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 MACC1Q6ZN28 852 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 DPPA4Q7L190 304 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 LRRC49Q8IUZ0 686 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 PHACTR4Q8IZ21 702 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 RBFAQ8N0V3 343 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 MDM1Q8TC05 714 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 APOLD1Q96LR9 279 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 MGME1Q9BQP7 344 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 ZNF670Q9BS34 389 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 APOOQ9BUR5 198 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 TCEAL2Q9H3H9 227 aaPredicted RBP16.33■□□□□ 0.2
BEST1-205ENST00000526988 EVA1BQ9NVM1 165 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 APOBEC3BQ9UH17 382 aaKnown RBP16.33■□□□□ 0.2
BEST1-205ENST00000526988 OR1A2Q9Y585 309 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 CSNK1G3Q9Y6M4 447 aa16.33■□□□□ 0.2
BEST1-205ENST00000526988 COL5A1P20908 1838 aaPredicted RBP16.33■□□□□ 0.2
BEST1-205ENST00000526988 A0A1W2PQ67 120 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 CFAP69A5D8W1 941 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 SRRM3A6NNA2 597 aaPredicted RBP16.32■□□□□ 0.2
BEST1-205ENST00000526988 SOCS5O75159 536 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 RECQL5O94762 991 aaPredicted RBP16.32■□□□□ 0.2
BEST1-205ENST00000526988 CPP00450 1065 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 CKMT1AP12532 417 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 CR2P20023 1033 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 HTR1BP28222 390 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 MAN1A1P33908 653 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 GARSP41250 739 aaKnown RBP16.32■□□□□ 0.2
BEST1-205ENST00000526988 PEX5P50542 639 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 E2F1Q01094 437 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 GALNT2Q10471 571 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 TARDBPQ13148 414 aaKnown RBP eCLIP16.32■□□□□ 0.2
BEST1-205ENST00000526988 ACOX1Q15067 660 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 PRRT3Q5FWE3 981 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 ENPP7Q6UWV6 458 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 LIPIQ6XZB0 460 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 RD3Q7Z3Z2 195 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 HID1Q8IV36 788 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms