RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 HSPH1Q92598 858 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 ALG3Q92685 438 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 MYO19Q96H55 970 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 APOLD1Q96LR9 279 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 RPRD1AQ96P16 312 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-204ENST00000526430 PSMB7Q99436 277 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 KCND1Q9NSA2 647 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 KLHL11Q9NVR0 708 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 TMEM248Q9NWD8 314 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 NLGN3Q9NZ94 848 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 LCMT1Q9UIC8 334 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 DMTF1Q9Y222 760 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 PCDHGA7Q9Y5G6 932 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 PCDHA3Q9Y5H8 950 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 U3KQA8 63 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 UNC13CQ8NB66 2214 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TRPM6Q9BX84 2022 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 A0A0D9SEW6 157 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 A0A1W2PP55 124 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TCAF2A6NFQ2 919 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 FANCGO15287 622 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 MID1O15344 667 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 CREB3O43889 395 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 NOBOXO60393 691 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TCEA3O75764 348 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 RNASEH2AO75792 299 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ZMPSTE24O75844 475 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 CD160O95971 181 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ATP5BP06576 529 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 THEGLP0DJG4 465 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ALPPL2P10696 532 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 RHOQP17081 205 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ERCC2P18074 760 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TGM2P21980 687 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 CTNNA2P26232 953 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ADPRHP54922 357 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ADCY2Q08462 1091 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TBR1Q16650 682 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 HADHQ16836 314 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 AADACL2Q6P093 401 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 MFSD7Q6UXD7 560 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TFAP2DQ7Z6R9 452 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 DAAM2Q86T65 1068 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ARHGAP12Q8IWW6 846 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 C17orf53Q8N3J3 647 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 CARNMT1Q8N4J0 409 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 NPWQ8N729 165 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 RTL3Q8N8U3 475 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TTC17Q96AE7 1141 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 VOPP1Q96AW1 172 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 HES6Q96HZ4 224 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 CALR3Q96L12 384 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 CSPG4P5Q96PW8 444 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 OMDQ99983 421 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 FEM1AQ9BSK4 669 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ZYG11BQ9C0D3 744 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 ABCB8Q9NUT2 735 aa11.08□□□□□ -0.64
NEDD8-204ENST00000526430 TRMT1Q9NXH9 659 aaKnown RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-204ENST00000526430 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 SPENQ96T58 3664 aaKnown RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 KRT86O43790 486 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 CLDN11O75508 207 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 TNFSF15O95150 251 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 FTCDO95954 541 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 PABPC1P11940 636 aaKnown RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 EPHB2P29323 1055 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 ACVRL1P37023 503 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 CSKP41240 450 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 CTSOP43234 321 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 CDH6P55285 790 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 SLC10A2Q12908 348 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 IGFBP7Q16270 282 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 HNRNPA1L2Q32P51 320 aaKnown RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 PPP6R3Q5H9R7 873 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 RABGAP1LQ5R372 815 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 MEI1Q5TIA1 1274 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 TTC39BQ5VTQ0 682 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 RBM44Q6ZP01 1051 aaKnown RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 RFX8Q6ZV50 586 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 RHOT1Q8IXI2 618 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 KATNAL2Q8IYT4 538 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 UMODL1-AS1Q8N2C9 162 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 OR7D4Q8NG98 312 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 IFI44Q8TCB0 444 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-204ENST00000526430 TBC1D31Q96DN5 1066 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 MRGPRX3Q96LB0 322 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 DUSP23Q9BVJ7 150 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 KDM4CQ9H3R0 1056 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 RETREG1Q9H6L5 497 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 LRRC19Q9H756 370 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 UCKL1Q9NWZ5 548 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 ANAPC2Q9UJX6 822 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 GGA2Q9UJY4 613 aa11.07□□□□□ -0.64
NEDD8-204ENST00000526430 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms