RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 FSBPO95073 299 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 PIGNO95427 931 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 PEX11BO96011 259 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 CXCL10P02778 98 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 GSTA1P08263 222 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 DLDP09622 509 aaKnown RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 LAG3P18627 525 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 MPSTP25325 297 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 ARNTP27540 789 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 STK19P49842 368 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 DSG1Q02413 1049 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 BNIP1Q12981 228 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 KYAT3Q6YP21 454 aaKnown RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 GBP7Q8N8V2 638 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 ANKLE1Q8NAG6 615 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 ARRDC2Q8TBH0 407 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 PIWIL2Q8TC59 973 aaKnown RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 HEXDCQ8WVB3 486 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 SKA2Q8WVK7 121 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 GATA5Q9BWX5 397 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 OSBPL1AQ9BXW6 950 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 LSM7Q9UK45 103 aaKnown RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 HBS1LQ9Y450 684 aaKnown RBP11.83□□□□□ -0.52
PTPRK-216ENST00000524481 SPO11Q9Y5K1 396 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 F5P12259 2224 aa11.83□□□□□ -0.52
PTPRK-216ENST00000524481 PRR5-ARHGAP8B1AHC4 643 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 NRG2O14511 850 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-216ENST00000524481 STX7O15400 261 aaKnown RBP11.82□□□□□ -0.52
PTPRK-216ENST00000524481 DCXO43602 365 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 PRAMEF11O60813 436 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 NDUFS3O75489 264 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 CLDN11O75508 207 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 SUPT7LO94864 414 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 TMCC1O94876 653 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 PROCP04070 461 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 RPSAP08865 295 aaKnown RBP11.82□□□□□ -0.52
PTPRK-216ENST00000524481 SERPINB5P36952 375 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 RAB10P61026 200 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 ARHGAP8P85298 464 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 UGP2Q16851 508 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 SMYD5Q6GMV2 418 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 BEND5Q7L4P6 421 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 PARP9Q8IXQ6 854 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 SCML4Q8N228 414 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 PDZD8Q8NEN9 1154 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 DTX3LQ8TDB6 740 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 TXLNGQ9NUQ3 528 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 A0A1B0GVM2 712 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 TCAF2A6NFQ2 919 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 NEDD8-MDP1E9PL57 170 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 CFLARO15519 480 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 TRIM13O60858 407 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 ARSAP15289 507 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 HADHAP40939 763 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 CDH4P55283 916 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 YBEYP58557 167 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-216ENST00000524481 ELF3P78545 371 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-216ENST00000524481 SMARCB1Q12824 385 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 PPM1LQ5SGD2 360 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 RNF43Q68DV7 783 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 KDELC1Q6UW63 502 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 MFSD6LQ8IWD5 586 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 GRIN3AQ8TCU5 1115 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 ZNF333Q96JL9 665 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 CLPTM1LQ96KA5 538 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 TOX2Q96NM4 488 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 OLFM1Q99784 485 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 C17orf80Q9BSJ5 609 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 TBC1D10AQ9BXI6 508 aa11.82□□□□□ -0.52
PTPRK-216ENST00000524481 CD3EAPO15446 510 aaKnown RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 UNC5CO95185 931 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 OAS1P00973 400 aaKnown RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 MMP2P08253 660 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 FGF3P11487 239 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 GTF2A1P52655 376 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 NME5P56597 212 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 SLC12A1Q13621 1099 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 ATG14Q6ZNE5 492 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 POF1BQ8WVV4 589 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 SORCS1Q8WY21 1168 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 CIPCQ9C0C6 399 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 LINC00597Q9H2U6 94 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 IGFLR1Q9H665 355 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 KCNK13Q9HB14 408 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 ATG2BQ96BY7 2078 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 RHOBTB1O94844 696 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 SERPINE1P05121 402 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 DHRS4L1P0CG22 281 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 SLC35E2BP0CK96 405 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 HOXD9P28356 352 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 ARRB2P32121 409 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 ABCE1P61221 599 aaKnown RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 ARL13AQ5H913 290 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 TMC5Q6UXY8 1006 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 SDCCAG8Q86SQ7 713 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-216ENST00000524481 HERC6Q8IVU3 1022 aa11.81□□□□□ -0.52
PTPRK-216ENST00000524481 ZNF683Q8IZ20 524 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms