RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-250	ENST00000523746	SMARCE1	Q969G3	411 aa		4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	FBXL8	Q96CD0	374 aa		4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	SLITRK1	Q96PX8	696 aa		4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	SDF4	Q9BRK5	362 aa		4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	SYNC	Q9H7C4	482 aa		4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	DECR2	Q9NUI1	292 aa		4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	LSM4	Q9Y4Z0	139 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	HS3ST3B1	Q9Y662	390 aa		4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	RSF1	Q96T23	1441 aa	Predicted RBP	4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	COL3A1	P02461	1466 aa	Predicted RBP	4.88	□□□□□ -1.63
PTK2-250	ENST00000523746	TMEM272	A0A1B0GTI8	110 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	FRMD3	A2A2Y4	597 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	TYW5	A2RUC4	315 aa	Known RBP	4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	LDB2	O43679	373 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	ETFA	P13804	333 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	MYF6	P23409	242 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	CHAT	P28329	748 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	GARS	P41250	739 aa	Known RBP	4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	TMPRSS3	P57727	454 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	ADORA2A-AS1	P86434	159 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	CREB5	Q02930	508 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	CUL4A	Q13619	759 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	KLF9	Q13886	244 aa	Predicted RBP	4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	CAPS	Q13938	189 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	FRG1	Q14331	258 aa	Known RBP	4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	PRAMEF19	Q5SWL8	479 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	QSOX2	Q6ZRP7	698 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	TRAPPC11	Q7Z392	1133 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	LURAP1L	Q8IV03	231 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	SLC35F3	Q8IY50	421 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	PDILT	Q8N807	584 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	SIN3A	Q96ST3	1273 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	CCDC68	Q9H2F9	335 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	PDZD7	Q9H5P4	517 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	MAGEE1	Q9HCI5	957 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	HAUS2	Q9NVX0	235 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	DLGAP2	Q9P1A6	1054 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	NFE2L3	Q9Y4A8	694 aa		4.87	□□□□□ -1.63
PTK2-250	ENST00000523746	EIF3CL	B5ME19	914 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	SNAP23	O00161	211 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	CHL1	O00533	1208 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	AP3D1	O14617	1153 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	SCAMP1	O15126	338 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	VILL	O15195	856 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	ATP2C2	O75185	946 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	PPFIA2	O75334	1257 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	SOX30	O94993	753 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	IPO7	O95373	1038 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	MMP2	P08253	660 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	RARG	P13631	454 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	TBXAS1	P24557	533 aa	Predicted RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	MMP13	P45452	471 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	ME1	P48163	572 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	NLRP5	P59047	1200 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	AIMP2	Q13155	320 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	KRT24	Q2M2I5	525 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	COL28A1	Q2UY09	1125 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	ZNF284	Q2VY69	593 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	ODF3L2	Q3SX64	289 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	JADE1	Q6IE81	842 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	KLHL35	Q6PF15	583 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	TSSK4	Q6SA08	328 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	LCTL	Q6UWM7	567 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	LINGO2	Q7L985	606 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	MRPL10	Q7Z7H8	261 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	PARP16	Q8N5Y8	322 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	NANOGP1	Q8N7R0	232 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	BEST2	Q8NFU1	509 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	GPT2	Q8TD30	523 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	RPL36AL	Q969Q0	106 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	FAM120B	Q96EK7	910 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	SLC41A2	Q96JW4	573 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	PPP1R13B	Q96KQ4	1090 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	FAM110A	Q9BQ89	295 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	C1QTNF5	Q9BXJ0	243 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	POLDIP3	Q9BY77	421 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	SPRTN	Q9H040	489 aa	Predicted RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	TMX4	Q9H1E5	349 aa	Predicted RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	WDR26	Q9H7D7	661 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	KIF9	Q9HAQ2	790 aa		4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	AAR2	Q9Y312	384 aa	Known RBP	4.86	□□□□□ -1.63
PTK2-250	ENST00000523746	IGLV5-39	A0A0G2JS06	123 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	FAM237A	A0A1B0GTK4	181 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	CDRT15L2	A8MXV6	281 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	MYO1G	B0I1T2	1018 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746		I6L893	689 aa	Predicted RBP	4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	HCRTR2	O43614	444 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	AHCYL1	O43865	530 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	COMP	P49747	757 aa	Predicted RBP	4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	F2RL1	P55085	397 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	ZP1	P60852	638 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	PRAME	P78395	509 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	MC1R	Q01726	317 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	GOLGA8DP	Q0D2H9	430 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	ST3GAL1	Q11201	340 aa		4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	DRAP1	Q14919	205 aa	Predicted RBP	4.85	□□□□□ -1.63
PTK2-250	ENST00000523746	TWIST1	Q15672	202 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms