RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PRAMEF10O60809 474 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 FAM87AP0C7U9 286 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 SDC4P31431 198 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 ETV5P41161 510 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 SUOXP51687 545 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 RHOAP61586 193 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 AGERQ15109 404 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 VWA3BQ502W6 1294 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 STRADAQ7RTN6 431 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 CCNJLQ8IV13 435 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 JOSD2Q8TAC2 188 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 GPT2Q8TD30 523 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 CENPIQ92674 756 aaPredicted RBP22.93■■□□□ 1.26
PVT1-218ENST00000523328 PDXPQ96GD0 296 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 APPL1Q9UKG1 709 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 DGKBQ9Y6T7 804 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 TSPAN11A1L157 253 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 PIGNO95427 931 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 PTPN9P43378 593 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 HDAC4P56524 1084 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 CERCAMQ5T4B2 595 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 OGFOD3Q6PK18 319 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 PHLDB2Q86SQ0 1253 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 VASH2Q86V25 355 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 ZNF354CQ86Y25 554 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 RTL3Q8N8U3 475 aaKnown RBP22.92■■□□□ 1.26
PVT1-218ENST00000523328 WDR92Q96MX6 357 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 SEMA3CQ99985 751 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 LHX3Q9UBR4 397 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 PCDHGA4Q9Y5G9 962 aa22.92■■□□□ 1.26
PVT1-218ENST00000523328 DOPEY2Q9Y3R5 2298 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 SUV39H1O43463 412 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 CYP1A1P04798 512 aaPredicted RBP22.91■■□□□ 1.26
PVT1-218ENST00000523328 UCHL3P15374 230 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 GLB1P16278 677 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 WT1P19544 449 aaPredicted RBP22.91■■□□□ 1.26
PVT1-218ENST00000523328 MMP8P22894 467 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 XPAP23025 273 aaPredicted RBP22.91■■□□□ 1.26
PVT1-218ENST00000523328 UGP2Q16851 508 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 MANEAQ5SRI9 462 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 ATG14Q6ZNE5 492 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 TMPRSS9Q7Z410 1059 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 ZFAND4Q86XD8 727 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 DTX1Q86Y01 620 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 SFTPA2Q8IWL1 248 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 Q8N9G6 341 aaPredicted RBP22.91■■□□□ 1.26
PVT1-218ENST00000523328 HCAR2Q8TDS4 363 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 SLC20A1Q8WUM9 679 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 NTAN1Q96AB6 310 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 TMEM159Q96B96 161 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 HMCESQ96FZ2 354 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 EXOC2Q96KP1 924 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 TUBGCP2Q9BSJ2 902 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 PCDH12Q9NPG4 1184 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 FOXJ2Q9P0K8 574 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 SEPT10Q9P0V9 454 aa22.91■■□□□ 1.26
PVT1-218ENST00000523328 NOCTQ9UK39 431 aaKnown RBP22.91■■□□□ 1.26
PVT1-218ENST00000523328 SDK2Q58EX2 2172 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 F8VZ95 297 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 AGRPO00253 132 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 TNFP01375 233 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 PRKCSHP14314 528 aaPredicted RBP22.9■■□□□ 1.26
PVT1-218ENST00000523328 PNLIPP16233 465 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 MTM1Q13496 603 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 CYTH1Q15438 398 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 CAMK4Q16566 473 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 TBR1Q16650 682 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 SPRED1Q7Z699 444 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 SLITRK4Q8IW52 837 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 PYROXD2Q8N2H3 581 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 ATL2Q8NHH9 583 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 FAM172AQ8WUF8 416 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 SUV39H2Q9H5I1 410 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 DAAM1Q9Y4D1 1078 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 RNF215Q9Y6U7 377 aa22.9■■□□□ 1.26
PVT1-218ENST00000523328 C9orf172C9J069 976 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 RASA4BC9J798 803 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 RASA4O43374 803 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 PCCBP05166 539 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 MMP12P39900 470 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 LIG3P49916 1009 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 YBEYP58557 167 aaPredicted RBP22.89■■□□□ 1.25
PVT1-218ENST00000523328 SRSF1Q07955 248 aaKnown RBP eCLIP22.89■■□□□ 1.25
PVT1-218ENST00000523328 SERINC3Q13530 473 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 TPD52L1Q16890 204 aaPredicted RBP22.89■■□□□ 1.25
PVT1-218ENST00000523328 MLKLQ8NB16 471 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 PLA2G15Q8NCC3 412 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 HTR3CQ8WXA8 447 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 OR1E3Q8WZA6 343 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 USP7Q93009 1102 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 CMKLR1Q99788 373 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 NCAPGQ9BPX3 1015 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 STK33Q9BYT3 514 aa22.89■■□□□ 1.25
PVT1-218ENST00000523328 SFTPCP11686 197 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 EPHB2P29323 1055 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 HLTFQ14527 1009 aaKnown RBP eCLIP22.88■■□□□ 1.252e-11■□□□□ 9.4
PVT1-218ENST00000523328 TAF8Q7Z7C8 310 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 ZSWIM9Q86XI8 627 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 ZNF677Q86XU0 584 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 DNAAF5Q86Y56 855 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms