RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CKAP5Q14008 2032 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 TSPAN11A1L157 253 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 PRR33A8MZF0 331 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 RIPK2O43353 540 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 BANF1O75531 89 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 PIGNO95427 931 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 NUDT17P0C025 328 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
CPNE3-205ENST00000522240 PGAM1P18669 254 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 PRKCHP24723 683 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 HSD17B3P37058 310 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 PRKCQQ04759 706 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 LAMB3Q13751 1172 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 GALNT3Q14435 633 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 HSF5Q4G112 596 aaPredicted RBP13.15□□□□□ -0.3
CPNE3-205ENST00000522240 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 STEAP4Q687X5 459 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 DENND2CQ68D51 928 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 HDXQ7Z353 690 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 MPP5Q8N3R9 675 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 PPHLN1Q8NEY8 458 aaKnown RBP13.15□□□□□ -0.3
CPNE3-205ENST00000522240 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 HCAR2Q8TDS4 363 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 UBLCP1Q8WVY7 318 aaPredicted RBP13.15□□□□□ -0.3
CPNE3-205ENST00000522240 C9orf72Q96LT7 481 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 SRPK1Q96SB4 655 aaKnown RBP13.15□□□□□ -0.3
CPNE3-205ENST00000522240 FUT8Q9BYC5 575 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 EPB41L4BQ9H329 900 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 SEMA4AQ9H3S1 761 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 SUV39H2Q9H5I1 410 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 FBRSQ9HAH7 460 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 HACD3Q9P035 362 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 IL36AQ9UHA7 158 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 SOX13Q9UN79 622 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 PCDHGC4Q9Y5F7 938 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 STON1Q9Y6Q2 735 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 WASF2Q9Y6W5 498 aa13.15□□□□□ -0.3
CPNE3-205ENST00000522240 FAM237BA0A1B0GVD1 139 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 MAGEB16A2A368 324 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 HEATR9A2RTY3 570 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 SHISA7A6NL88 538 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 BNIP3LO60238 219 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 SIN3BO75182 1162 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 EGFP01133 1207 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 PRNPP04156 253 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 ADRA1DP25100 572 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 PHBP35232 272 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 MRPS21P82921 87 aaKnown RBP13.14□□□□□ -0.31
CPNE3-205ENST00000522240 MSLNQ13421 630 aaPredicted RBP13.14□□□□□ -0.31
CPNE3-205ENST00000522240 MTM1Q13496 603 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 FRG1Q14331 258 aaKnown RBP13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CASP8Q14790 479 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 QPCTQ16769 361 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 PCID2Q5JVF3 399 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CERCAMQ5T4B2 595 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 C9orf64Q5T6V5 341 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CASC4Q6P4E1 433 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 BRAT1Q6PJG6 821 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 GDPD4Q6W3E5 623 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 NLRP9Q7RTR0 991 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 DSG4Q86SJ6 1040 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CAMK1DQ8IU85 385 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 ANKMY2Q8IV38 441 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 SLC25A41Q8N5S1 370 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CHST14Q8NCH0 376 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 FAM3CQ92520 227 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 PEX13Q92968 403 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 RMDN1Q96DB5 314 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 GABRG3Q99928 467 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 KIFC1Q9BW19 673 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 VIPAS39Q9H9C1 493 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CD320Q9NPF0 282 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 ARHGEF3Q9NR81 526 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 PIH1D1Q9NWS0 290 aaKnown RBP13.14□□□□□ -0.31
CPNE3-205ENST00000522240 CACNA2D2Q9NY47 1150 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 DKK3Q9UBP4 350 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 ZC3H7BQ9UGR2 993 aaKnown RBP13.14□□□□□ -0.31
CPNE3-205ENST00000522240 RIMKLBQ9ULI2 386 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 PPIL1Q9Y3C6 166 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 TCAF1Q9Y4C2 921 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 PCDHB9Q9Y5E1 797 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 MAD1L1Q9Y6D9 718 aa13.14□□□□□ -0.31
CPNE3-205ENST00000522240 A0A087WUV0 522 aaPredicted RBP13.13□□□□□ -0.31
CPNE3-205ENST00000522240 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 ATP8B1O43520 1251 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 LEFTY1O75610 366 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 USP1O94782 785 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 PAPSS2O95340 614 aaPredicted RBP13.13□□□□□ -0.31
CPNE3-205ENST00000522240 UGT2B4P06133 528 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 POLBP06746 335 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 EPHX1P07099 455 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 PDHA1P08559 390 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 HLA-EP13747 358 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 NFKBIAP25963 317 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 NTSR1P30989 418 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 GKP32189 559 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 STX2P32856 288 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 EPHB1P54762 984 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 CAMK2GQ13555 558 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms