RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SOCS5O75159 536 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 CCNB1P14635 433 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 RXRGP48443 463 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 LIG3P49916 1009 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 NAP1L1P55209 391 aaKnown RBP20.79■□□□□ 0.92
TRIM35-203ENST00000521253 POLR2LP62875 67 aaKnown RBP20.79■□□□□ 0.92
TRIM35-203ENST00000521253 PPIDQ08752 370 aaKnown RBP20.79■□□□□ 0.92
TRIM35-203ENST00000521253 ITKQ08881 620 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 TRAF2Q12933 501 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 LLGL1Q15334 1064 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 KYAT3Q6YP21 454 aaKnown RBP20.79■□□□□ 0.92
TRIM35-203ENST00000521253 PTAR1Q7Z6K3 402 aaPredicted RBP20.79■□□□□ 0.92
TRIM35-203ENST00000521253 KIAA1328Q86T90 577 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 CCDC13Q8IYE1 715 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 KATNAL2Q8IYT4 538 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 OXR1Q8N573 874 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 DENND6BQ8NEG7 585 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 FAM174AQ8TBP5 190 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 SPOCK2Q92563 424 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 KRT35Q92764 455 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 CENPTQ96BT3 561 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 CALR3Q96L12 384 aaKnown RBP20.79■□□□□ 0.92
TRIM35-203ENST00000521253 SEMA3CQ99985 751 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 POLR1EQ9GZS1 481 aaKnown RBP20.79■□□□□ 0.92
TRIM35-203ENST00000521253 BTBD3Q9Y2F9 522 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 COQ6Q9Y2Z9 468 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 TMEM131Q92545 1883 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 PCNX2A6NKB5 2137 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 KRT10P13645 584 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 C6P13671 934 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 EPHA8P29322 1005 aaPredicted RBP20.78■□□□□ 0.92
TRIM35-203ENST00000521253 SIM1P81133 766 aaPredicted RBP20.78■□□□□ 0.92
TRIM35-203ENST00000521253 KDM7AQ6ZMT4 941 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 SPOCD1Q6ZMY3 1216 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 GATAD2AQ86YP4 633 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 RHBDD1Q8TEB9 315 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 SAP25Q8TEE9 199 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 PDCD6IPQ8WUM4 868 aaKnown RBP20.78■□□□□ 0.92
TRIM35-203ENST00000521253 OLFM3Q96PB7 478 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 GPR27Q9NS67 375 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 AMACRQ9UHK6 382 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 TTLL3Q9Y4R7 772 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 PCDHB9Q9Y5E1 797 aa20.78■□□□□ 0.92
TRIM35-203ENST00000521253 KCNK1O00180 336 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 YKT6O15498 198 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 ZRANB2O95218 330 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM35-203ENST00000521253 HLA-DQB2P05538 268 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 GRK6P43250 576 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 RABIFP47224 123 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 DSC2Q02487 901 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 RALGDSQ12967 914 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 BNIP3Q12983 259 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 TFDP2Q14188 446 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 PDK1Q15118 436 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 TRIP6Q15654 476 aaKnown RBP20.77■□□□□ 0.92
TRIM35-203ENST00000521253 KAZNQ674X7 775 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 ALG1LQ6GMV1 187 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 RCOR2Q8IZ40 523 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM35-203ENST00000521253 TP53I13Q8NBR0 393 aaPredicted RBP20.77■□□□□ 0.92
TRIM35-203ENST00000521253 BAHD1Q8TBE0 780 aaPredicted RBP20.77■□□□□ 0.92
TRIM35-203ENST00000521253 C1QTNF7Q9BXJ2 289 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 MBNL1Q9NR56 388 aaKnown RBP20.77■□□□□ 0.92
TRIM35-203ENST00000521253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM35-203ENST00000521253 RAI2Q9Y5P3 530 aa20.77■□□□□ 0.92
TRIM35-203ENST00000521253 SHROOM3Q8TF72 1996 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 A0A0U1RQJ8 604 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 A0A1W2PQ67 120 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 CST8O60676 142 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 NEBLO76041 1014 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 CPP00450 1065 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 JCHAINP01591 159 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 ITGAVP06756 1048 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 IGFALSP35858 605 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 GSDMDP57764 484 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 PFN3P60673 137 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 ADCY2Q08462 1091 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 AP1B1Q10567 949 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 ZBTB17Q13105 803 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 IHHQ14623 411 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 TFDP3Q5H9I0 405 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 DPPA4Q7L190 304 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 LRRC57Q8N9N7 239 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 EXD1Q8NHP7 514 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 ARRDC2Q8TBH0 407 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 KIAA1524Q8TCG1 905 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 HAUS2Q9NVX0 235 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 SAE1Q9UBE0 346 aaPredicted RBP20.76■□□□□ 0.91
TRIM35-203ENST00000521253 B4GALT6Q9UBX8 382 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 TRIM10Q9UDY6 481 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 SPEGQ15772 3267 aa20.76■□□□□ 0.91
TRIM35-203ENST00000521253 hCG_1818297A0A087WSY0 165 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 GRID2IPA4D2P6 1211 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 CFAP69A5D8W1 941 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 A8MX80 341 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 PPP1R12AO14974 1030 aaPredicted RBP20.75■□□□□ 0.91
TRIM35-203ENST00000521253 LZTS3O60299 673 aaPredicted RBP20.75■□□□□ 0.91
TRIM35-203ENST00000521253 PGLSO95336 258 aa20.75■□□□□ 0.91
TRIM35-203ENST00000521253 CTNNA1P35221 906 aaKnown RBP20.75■□□□□ 0.91
TRIM35-203ENST00000521253 IFI35P80217 286 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms