RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SCHIP1Q9P0W5 487 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 IL36AQ9UHA7 158 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SLC12A6Q9UHW9 1150 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 TSPAN16Q9UKR8 245 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 KIAA1257Q9ULG3 409 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 FRMD4BQ9Y2L6 1034 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 F8P00451 2351 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 ARHGEF17Q96PE2 2063 aaPredicted RBP4.96□□□□□ -1.61
SDCBP-207ENST00000520168 A1L4Q6 167 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 GOLGA6L22H0YM25 854 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 HNRNPRO43390 633 aaKnown RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 SEMA7AO75326 666 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 RASGRP1O95267 797 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CTSLP07711 333 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 PDGFRAP16234 1089 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 TCN2P20062 427 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 PDCP20941 246 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 TACR2P21452 398 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 HTR1BP28222 390 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 L1CAMP32004 1257 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ADH7P40394 386 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ETV5P41161 510 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 HK3P52790 923 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 YWHAEP62258 255 aaKnown RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ABHD18Q0P651 414 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CUL4AQ13619 759 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ARHGEF7Q14155 803 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 STILQ15468 1287 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ZNF394Q53GI3 561 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CERCAMQ5T4B2 595 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 DCAF12Q5T6F0 453 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 PHF19Q5T6S3 580 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ASB18Q6ZVZ8 466 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 UNC13DQ70J99 1090 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 INTS8Q75QN2 995 aaKnown RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ZC3H18Q86VM9 953 aaKnown RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CHSY1Q86X52 802 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 NELFCDQ8IXH7 590 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 SRRM1Q8IYB3 904 aaKnown RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 RBFAQ8N0V3 343 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 LGI2Q8N0V4 545 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 NLGN4XQ8N0W4 816 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CCAR2Q8N163 923 aaKnown RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CFAP52Q8N1V2 620 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ATP6V0D2Q8N8Y2 350 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 AGBL5Q8NDL9 886 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 GPR156Q8NFN8 814 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 NLGN4YQ8NFZ3 816 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 OR2A12Q8NGT7 310 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 PCDH19Q8TAB3 1148 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 PLEKHO2Q8TD55 490 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 ZDHHC1Q8WTX9 485 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 KLF6Q99612 283 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 FEM1AQ9BSK4 669 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 EDEM3Q9BZQ6 932 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CLPBQ9H078 707 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 CISHQ9NSE2 258 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 DMAC2Q9NW81 257 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 GULP1Q9UBP9 304 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 FBXO2Q9UK22 296 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 VPS28Q9UK41 221 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 GPR34Q9UPC5 381 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 TP53TG5Q9Y2B4 290 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 FADS3Q9Y5Q0 445 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 RNF215Q9Y6U7 377 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 MED13LQ71F56 2210 aa4.96□□□□□ -1.62
SDCBP-207ENST00000520168 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.62
SDCBP-207ENST00000520168 HIVEP1P15822 2718 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 TNRC6AQ8NDV7 1962 aaKnown RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 CXorf51AA0A1B0GTR3 108 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 PVALEFA0A1B0GWK0 134 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 HEATR9A2RTY3 570 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 KCNU1A8MYU2 1149 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 B4E171 279 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 PDXKO00764 312 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 NEMP1O14524 444 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 SPTLC2O15270 562 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 RAD51BO15315 384 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 RAD1O60671 282 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 CLDN11O75508 207 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 LEFTY1O75610 366 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 RFPL1O75677 317 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 CLDN1O95832 211 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 MOCS2O96007 188 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 LDLRP01130 860 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 SRCP12931 536 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 GRNP28799 593 aaKnown RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 GTF2H1P32780 548 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 EIF4A3P38919 411 aaKnown RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 TSPAN7P41732 249 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 LEPRP48357 1165 aaKnown RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 RAD23BP54727 409 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 DLG4P78352 724 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 NRG1Q02297 640 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 C1orf61Q13536 156 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 PEX6Q13608 980 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 LRP8Q14114 963 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 C16orf72Q14CZ0 275 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms