RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	KLK13	Q9UKR3	277 aa		24.35	■■□□□ 1.49
CNOT7-204	ENST00000518885	KNL1	Q8NG31	2342 aa		24.35	■■□□□ 1.49
CNOT7-204	ENST00000518885	MFSD11	O43934	449 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	SDC3	O75056	442 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	PIAS2	O75928	621 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	DKK1	O94907	266 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	TOP3B	O95985	862 aa	Known RBP	24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	CSF2	P04141	144 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	ELFN1	P0C7U0	828 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	C6	P13671	934 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	CA4	P22748	312 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	KDELR1	P24390	212 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	HTR1B	P28222	390 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	LIG3	P49916	1009 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	TAS2R40	P59535	323 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	ZNF211	Q13398	564 aa	Predicted RBP	24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	AGER	Q15109	404 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	ATP13A4	Q4VNC1	1196 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	NCBP2-AS2	Q69YL0	99 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	KANSL1	Q7Z3B3	1105 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	TC2N	Q8N9U0	490 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	FAF2	Q96CS3	445 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	POLR1E	Q9GZS1	481 aa	Known RBP	24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	TOR4A	Q9NXH8	423 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	DDX56	Q9NY93	547 aa	Known RBP	24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	CHD8	Q9HCK8	2581 aa		24.34	■■□□□ 1.49
CNOT7-204	ENST00000518885	CABIN1	Q9Y6J0	2220 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	LRRD1	A4D1F6	860 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	MUSK	O15146	869 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	RFPL3	O75679	317 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	PEX11B	O96011	259 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	CP	P00450	1065 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	PROS1	P07225	676 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	NME1	P15531	152 aa	Known RBP	24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	ZFX	P17010	805 aa	Predicted RBP	24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	CKMT2	P17540	419 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	CCNC	P24863	283 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	MAGEA1	P43355	309 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	PEX5	P50542	639 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	ITK	Q08881	620 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	FZD2	Q14332	565 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	ST3GAL2	Q16842	350 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	CCDC157	Q569K6	752 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	RHOT1	Q8IXI2	618 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	TP53I13	Q8NBR0	393 aa	Predicted RBP	24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	OR4C6	Q8NH72	309 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	PDCD6IP	Q8WUM4	868 aa	Known RBP	24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	TSGA13	Q96PP4	275 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	NLGN3	Q9NZ94	848 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	NCKIPSD	Q9NZQ3	722 aa		24.33	■■□□□ 1.49
CNOT7-204	ENST00000518885	TRAFD1	O14545	582 aa	Predicted RBP	24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	MATN3	O15232	486 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	SPOP	O43791	374 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	ITIH2	P19823	946 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	CR2	P20023	1033 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	IGFALS	P35858	605 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	NOP2	P46087	812 aa	Known RBP	24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	BLK	P51451	505 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	ZNF75D	P51815	510 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	MACC1	Q6ZN28	852 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	DPPA4	Q7L190	304 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	TEX26	Q8N6G2	289 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	CALR3	Q96L12	384 aa	Known RBP	24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	PANX2	Q96RD6	677 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	USP29	Q9HBJ7	922 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	NT5M	Q9NPB1	228 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	CSNK1G3	Q9Y6M4	447 aa		24.32	■■□□□ 1.48
CNOT7-204	ENST00000518885	SCAMP1	O15126	338 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	HTRA2	O43464	458 aa	Predicted RBP	24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	CYP2A6	P11509	494 aa	Predicted RBP	24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	HNF1B	P35680	557 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	DAB2	P98082	770 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	IRF4	Q15306	451 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	ARMC12	Q5T9G4	340 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	TMPRSS7	Q7RTY8	843 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	CCNY	Q8ND76	341 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	TBATA	Q96M53	351 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	RNF157	Q96PX1	679 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	SLC13A1	Q9BZW2	595 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	NOD2	Q9HC29	1040 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	SPAST	Q9UBP0	616 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	PHTF1	Q9UMS5	762 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	PCDHGC4	Q9Y5F7	938 aa		24.31	■■□□□ 1.48
CNOT7-204	ENST00000518885	JUND	P17535	347 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	DUSP3	P51452	185 aa	Predicted RBP	24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	HADHB	P55084	474 aa	Known RBP	24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	MTM1	Q13496	603 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	USP45	Q70EL2	814 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	ZSWIM9	Q86XI8	627 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	SLC25A45	Q8N413	288 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	MAML1	Q92585	1016 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	GATA6	Q92908	595 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	HDAC11	Q96DB2	347 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	COQ6	Q9Y2Z9	468 aa		24.3	■■□□□ 1.48
CNOT7-204	ENST00000518885	APOL1	O14791	398 aa		24.29	■■□□□ 1.48
CNOT7-204	ENST00000518885	FFAR2	O15552	330 aa		24.29	■■□□□ 1.48
CNOT7-204	ENST00000518885	SIGLEC6	O43699	453 aa		24.29	■■□□□ 1.48
CNOT7-204	ENST00000518885	LCA5L	O95447	670 aa		24.29	■■□□□ 1.48
CNOT7-204	ENST00000518885	KRT1	P04264	644 aa		24.29	■■□□□ 1.48
CNOT7-204	ENST00000518885	CCNB1	P14635	433 aa		24.29	■■□□□ 1.48

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms