RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 LHPPQ9H008 270 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 BPIFA1Q9NP55 256 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 CYSLTR2Q9NS75 346 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 KRT84Q9NSB2 600 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 TBC1D22BQ9NU19 505 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 EHD2Q9NZN4 543 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 DLGAP2Q9P1A6 1054 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 PAM16Q9Y3D7 125 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 LYVE1Q9Y5Y7 322 aa3.16□□□□□ -1.9
SKP1-203ENST00000517625 IGHV4-28A0A0C4DH34 117 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 OR6C75A6NL08 312 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 H3BNX3 289 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 SCAMP1O15126 338 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 BCAT2O15382 392 aaPredicted RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 SEC14L5O43304 696 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 KLK8O60259 260 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 ATP2C2O75185 946 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 IPO7O95373 1038 aaKnown RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 BMP15O95972 392 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 LCATP04180 440 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 SPARCP09486 303 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 ETFAP13804 333 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 NAGAP17050 411 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 CDC25AP30304 524 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 TMPRSS3P57727 454 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 RPS3AP61247 264 aaKnown RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 ZBED6P86452 979 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 PPATQ06203 517 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 CSTF3Q12996 717 aaKnown RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 ITGADQ13349 1161 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 CAPSQ13938 189 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 KRT32Q14532 448 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 ZNF284Q2VY69 593 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 SNX30Q5VWJ9 437 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 TMEM154Q6P9G4 183 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 BRINP3Q76B58 766 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 IRF2BP2Q7Z5L9 587 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 LURAP1LQ8IV03 231 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 MB21D2Q8IYB1 491 aaPredicted RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 HACE1Q8IYU2 909 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 ZCCHC9Q8N567 271 aaKnown RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 ARHGEF2Q92974 986 aaKnown RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 GTF3C6Q969F1 213 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 URB1-AS1Q96HZ7 61 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 SH3GL2Q99962 352 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 HEMGNQ9BXL5 484 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 IFIH1Q9BYX4 1025 aaKnown RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 DCLK3Q9C098 648 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 USP44Q9H0E7 712 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 MAGEE1Q9HCI5 957 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 ABI3Q9P2A4 366 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 SLCO3A1Q9UIG8 710 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 INTS6Q9UL03 887 aaKnown RBP3.15□□□□□ -1.91
SKP1-203ENST00000517625 NFE2L3Q9Y4A8 694 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 KCNE2Q9Y6J6 123 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 SQORQ9Y6N5 450 aa3.15□□□□□ -1.91
SKP1-203ENST00000517625 ANKRD18BA2A2Z9 1011 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 LIPT2A6NK58 231 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 KDM4EB2RXH2 506 aaPredicted RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 TNFRSF13BO14836 293 aaPredicted RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 RGS14O43566 566 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 ITM2AO43736 263 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 LIASO43766 372 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CRYABP02511 175 aaKnown RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 IGKV2-30P06310 120 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 HOXC6P09630 235 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CBSLP0DN79 551 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 ITGAXP20702 1163 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CBSP35520 551 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 AMTP48728 403 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CXCR3P49682 368 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CLCN5P51795 746 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 NUDT6P53370 316 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 PRAMEP78395 509 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 TFAP4Q01664 338 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 EGR4Q05215 589 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 NIPAL4Q0D2K0 466 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 TMEM115Q12893 351 aaPredicted RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 DCTN2Q13561 401 aaKnown RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 NEDD9Q14511 834 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 ARHGEF6Q15052 776 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 ADIPOQQ15848 244 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 SOWAHAQ2M3V2 549 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 SOWAHCQ53LP3 525 aaPredicted RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 PRAMEF19Q5SWL8 479 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 FNBP1LQ5T0N5 605 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CCDC30Q5VVM6 783 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CES5AQ6NT32 575 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CCDC129Q6ZRS4 1044 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 C9orf47Q6ZRZ4 202 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 Q6ZSV7 163 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 Q6ZTK2 550 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 ZNF367Q7RTV3 350 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 ARHGAP12Q8IWW6 846 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 PARP16Q8N5Y8 322 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 FRMD1Q8N878 549 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 TMEM116Q8NCL8 245 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 AGBL3Q8NEM8 1001 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 SCARB1Q8WTV0 552 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 NSMCE1Q8WV22 266 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms