RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MRPL45Q9BRJ2 306 aaKnown RBP6.7□□□□□ -1.34
CPNE3-203ENST00000517490 NOL6Q9H6R4 1146 aaKnown RBP6.7□□□□□ -1.34
CPNE3-203ENST00000517490 COL16A1Q07092 1604 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-203ENST00000517490 WNT10BO00744 389 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 VILLO15195 856 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 LTFP02788 710 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 PTPN3P26045 913 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 TAF12Q16514 161 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 CACHD1Q5VU97 1274 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 RSBN1Q5VWQ0 802 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-203ENST00000517490 FAM45BPQ6NSW5 357 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 NANOGNBQ7Z5D8 188 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 ZBTB46Q86UZ6 589 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 FAM126BQ8IXS8 530 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 MICALL2Q8IY33 904 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 CHCHD4Q8N4Q1 142 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 CPSF7Q8N684 471 aaKnown RBP6.7□□□□□ -1.34
CPNE3-203ENST00000517490 FAM45AQ8TCE6 357 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 RMDN1Q96DB5 314 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 TWNKQ96RR1 684 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 LIMD1Q9UGP4 676 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 HMGXB4Q9UGU5 601 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 DSEQ9UL01 958 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 FZD10Q9ULW2 581 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 TMED5Q9Y3A6 229 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 RIPK3Q9Y572 518 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 CEPT1Q9Y6K0 416 aa6.7□□□□□ -1.34
CPNE3-203ENST00000517490 RRN3P2A6NIE6 340 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 IRF6O14896 467 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 ZBTB24O43167 697 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SYNCRIPO60506 623 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SORBS2O94875 1100 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 MED26O95402 600 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SEC24AO95486 1093 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 ALOX15P16050 662 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 CYP2C18P33260 490 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SOX6P35712 828 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 BCAP31P51572 246 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 VAC14Q08AM6 782 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 GTF2H3Q13889 308 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 RFX4Q33E94 735 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 HSDL1Q3SXM5 330 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 IL31Q6EBC2 164 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SLC27A1Q6PCB7 646 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 KIAA0408Q6ZU52 694 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM26Q6ZUK4 368 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM110Q86TL2 294 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SLCO6A1Q86UG4 719 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 CENPSQ8N2Z9 138 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 FNDC5Q8NAU1 212 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 OR56A4Q8NGH8 313 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 POP5Q969H6 163 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 DCPSQ96C86 337 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 ITPKCQ96DU7 683 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SORT1Q99523 831 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 OR12D3Q9UGF7 316 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TRMT6Q9UJA5 497 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 DERAQ9Y315 318 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 KLRG2A4D1S0 409 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SPDYE16A6NNV3 312 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 EVPLLA8MZ36 301 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 VPS26AO75436 327 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 C7P10643 843 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SLC2A3P11169 496 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 NPR3P17342 541 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 GLDCP23378 1020 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 ADRA1BP35368 520 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SERPINH1P50454 418 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 CCT8P50990 548 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TXNL4AP83876 142 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 BNIP3Q12983 259 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TRAF3Q13114 568 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM132BQ14DG7 1078 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SPATA19Q7Z5L4 167 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 OFCC1Q8IZS5 231 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 NETO2Q8NC67 525 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 ZUFSPQ96AP4 578 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 GPR22Q99680 433 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 NEUROD4Q9HD90 331 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 INTS10Q9NVR2 710 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SH3BP1Q9Y3L3 701 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TOGARAM1Q9Y4F4 1720 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 PNMA8CA0A1B0GUJ8 204 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TBKBP1A7MCY6 615 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 AREL1O15033 823 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 DLX3O60479 287 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 FAM20BO75063 409 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 NADKO95544 446 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 ANXA6P08133 673 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 THRBP10828 461 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF16P17020 682 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 HOXB6P17509 224 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 NMBRP28336 390 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 STT3AP46977 705 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 RENBPP51606 427 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 DAB2P98082 770 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 TUBA3CQ13748 450 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 SPATS1Q496A3 300 aa6.69□□□□□ -1.34
CPNE3-203ENST00000517490 CELF3Q5SZQ8 465 aaKnown RBP6.69□□□□□ -1.34
CPNE3-203ENST00000517490 CATSPERGQ6ZRH7 1159 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms