RNA–Protein interactions for RNA: ENST00000516965.1

SNORA48.10-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 160 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.10-201ENST00000516965 ANKRD10Q9NXR5 420 aa4.31□□□□□ -1.72
SNORA48.10-201ENST00000516965 CHORDC1Q9UHD1 332 aaPredicted RBP4.31□□□□□ -1.72
SNORA48.10-201ENST00000516965 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
SNORA48.10-201ENST00000516965 COX11Q9Y6N1 276 aa4.31□□□□□ -1.72
SNORA48.10-201ENST00000516965 A3GALT2U3KPV4 340 aa4.31□□□□□ -1.72
SNORA48.10-201ENST00000516965 A0A1W2PQ09 198 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 WIPF3A6NGB9 483 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 STMND1H3BQB6 276 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 HCRTR2O43614 444 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 TLX3O43711 291 aaPredicted RBP4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 NKX2-2O95096 273 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 OR2C1O95371 312 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 CLDN7O95471 211 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 ETFAP13804 333 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 ZNF182P17025 639 aaPredicted RBP4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 TMEM11P17152 192 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 SAT1P21673 171 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 PIK3CAP42336 1068 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 MRPL12P52815 198 aaKnown RBP4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 FAM27E3Q08E93 113 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 CAPSQ13938 189 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 BECN1Q14457 450 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 IRF3Q14653 427 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 ARHGEF6Q15052 776 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 ESCO2Q56NI9 601 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 RAB41Q5JT25 222 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 PRAMEF19Q5SWL8 479 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 ZNF280DQ6N043 979 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 SLC18B1Q6NT16 456 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 KRT74Q7RTS7 529 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 YTHDF3Q7Z739 585 aaKnown RBP4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 KDM1BQ8NB78 822 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 IGFBPL1Q8WX77 278 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 ZFYVE19Q96K21 471 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 TEX12Q9BXU0 123 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 MAGEE1Q9HCI5 957 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 ADARB2Q9NS39 739 aaKnown RBP4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 TMEM184CQ9NVA4 438 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 MSRB1Q9NZV6 116 aa4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 SUCLA2Q9P2R7 463 aaPredicted RBP4.3□□□□□ -1.72
SNORA48.10-201ENST00000516965 A0A0U1RQF3 1178 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 FAM237AA0A1B0GTK4 181 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 SYNDIG1LA6NDD5 238 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 GAGE12JA6NER3 117 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 A6NNC1 897 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 CDRT15L2A8MXV6 281 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 BTBD18B2RXH4 712 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 E5RJQ4 531 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 TLR2O60603 784 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 CNOT3O75175 753 aaKnown RBP4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 KLKB1P03952 638 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 CHRNB1P11230 501 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 IL7RP16871 459 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 AGAP20933 346 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 SHMT1P34896 483 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 AVPR1AP37288 418 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 CDH12P55289 794 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 IFI35P80217 286 aaPredicted RBP4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 TFAP4Q01664 338 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 LPIN1Q14693 890 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 KRT24Q2M2I5 525 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 CXorf66Q5JRM2 361 aaPredicted RBP4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 C6orf141Q5SZD1 244 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 GPR139Q6DWJ6 353 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 JADE1Q6IE81 842 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 TMEM71Q6P5X7 295 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 PRPF39Q86UA1 669 aaKnown RBP4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 RBFAQ8N0V3 343 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 PARP16Q8N5Y8 322 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 BEST2Q8NFU1 509 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 PRSS3P2Q8NHM4 247 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 SLC35F5Q8WV83 523 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 TMEM18Q96B42 140 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 SAT2Q96F10 170 aaPredicted RBP4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 SLITRK1Q96PX8 696 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 TMEM47Q9BQJ4 181 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 QTRT1Q9BXR0 403 aaKnown RBP4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 KLHL31Q9H511 634 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 CNOT8Q9UFF9 292 aaKnown RBP4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 MAU2Q9Y6X3 613 aa4.29□□□□□ -1.72
SNORA48.10-201ENST00000516965 TTBK1Q5TCY1 1321 aaPredicted RBP4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 A0A0G2JK05 382 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 FAM90A8PA6NJQ4 464 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 KCNU1A8MYU2 1149 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 MDM4O15151 490 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 HS6ST1O60243 411 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 KLK8O60259 260 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 ZC3H11AO75152 810 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 PPFIA2O75334 1257 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 ERAL1O75616 437 aaKnown RBP4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 PGM3O95394 542 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 DNTTP04053 509 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 SRPRAP08240 638 aaKnown RBP4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 MMP2P08253 660 aa4.28□□□□□ -1.72
SNORA48.10-201ENST00000516965 FAM90A13PP0C7W8 464 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms