RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PEG10Q86TG7 708 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM35AQ86V20 835 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 PARGQ86W56 976 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 IFNLR1Q8IU57 520 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 IGSF22Q8N9C0 903 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ZNF579Q8NAF0 562 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 RNF214Q8ND24 703 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ERMNQ8TAM6 284 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 KIAA1524Q8TCG1 905 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SPPL2BQ8TCT7 592 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ADAMTS17Q8TE56 1095 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM222BQ8WU58 562 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ASB11Q8WXH4 323 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 BSNDQ8WZ55 320 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ANP32BQ92688 251 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 HDAC10Q969S8 669 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TMEM143Q96AN5 459 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 PGBD1Q96JS3 809 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 GPR137Q96N19 417 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ZNF830Q96NB3 372 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 NACC1Q96RE7 527 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 DUSP9Q99956 384 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TIPINQ9BVW5 301 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 RBM4Q9BWF3 364 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 C1QTNF2Q9BXJ5 285 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 CLPBQ9H078 707 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 RSPH9Q9H1X1 276 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TCEAL2Q9H3H9 227 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TTC12Q9H892 705 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 CHODLQ9H9P2 273 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 UNKLQ9H9P5 680 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TUFT1Q9NNX1 390 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 FZD3Q9NPG1 666 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 FBXO8Q9NRD0 319 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 PLSCR2Q9NRY7 297 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ANKEF1Q9NU02 776 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 AURKAIP1Q9NWT8 199 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 KCND2Q9NZV8 630 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 MARK1Q9P0L2 795 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 WDR35Q9P2L0 1181 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 IKZF3Q9UKT9 509 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 VAV3Q9UKW4 847 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 CFAP45Q9UL16 551 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 PCDHB10Q9UN67 800 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC27A6Q9Y2P4 619 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 GDAQ9Y2T3 454 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SRPRBQ9Y5M8 271 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 NPFFR2Q9Y5X5 522 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 CLCA1A8K7I4 914 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 TRIM77I1YAP6 450 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 MEN1O00255 615 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 GAPDHSO14556 408 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 RASGRF2O14827 1237 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 POLR1CO15160 346 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 DGAT1O75907 488 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 SLITRK3O94933 977 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 YEATS4O95619 227 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 ADCY5O95622 1261 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 CELA2BP08218 269 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 SLFN14P0C7P3 912 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 CCNYL3P0C7X3 344 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 ZSCAN22P10073 491 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 ABCD1P33897 745 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 MCM7P33993 719 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 GARSP41250 739 aaKnown RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 TXKP42681 527 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 PPP3CCP48454 512 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 CLDN2P57739 230 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 CBX1P83916 185 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 B4GALNT1Q00973 533 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 GUCY1B3Q02153 619 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 CD69Q07108 199 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 DPYDQ12882 1025 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 FOXL1Q12952 345 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 MXD4Q14582 209 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 TLR1Q15399 786 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF174Q15697 407 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM249Q2WGJ8 235 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 HYIQ5T013 277 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC183Q5T5S1 534 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 TIGD7Q6NT04 549 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 Q6ZSR6 202 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 TPGS1Q6ZTW0 290 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 SND1Q7KZF4 910 aaKnown RBP eCLIP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 MIER3Q7Z3K6 550 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 PTAR1Q7Z6K3 402 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 LRRTM3Q86VH5 581 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 DOLPP1Q86YN1 238 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC71Q8IV32 467 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 GALNT16Q8N428 558 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 BEND7Q8N7W2 519 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 C2orf15Q8WU43 125 aaKnown RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 BTN2A2Q8WVV5 523 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 MAML1Q92585 1016 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 KAT2AQ92830 837 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 KCNN1Q92952 543 aa3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF837Q96EG3 531 aaPredicted RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 ZMAT2Q96NC0 199 aaKnown RBP3.21□□□□□ -1.9
SCARNA13-201ENST00000516672 OLFM1Q99784 485 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms