RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 COL8A1P27658 744 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 GNA15P30679 374 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 ACVRL1P37023 503 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 CXCR3P49682 368 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 SULT1E1P49888 294 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 NDUFA8P51970 172 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 PMS1P54277 932 aaKnown RBP10.58□□□□□ -0.72
CLDND1-231ENST00000515620 SNRPD1P62314 119 aaKnown RBP10.58□□□□□ -0.72
CLDND1-231ENST00000515620 FKBP3Q00688 224 aaKnown RBP10.58□□□□□ -0.72
CLDND1-231ENST00000515620 DNM1Q05193 864 aaKnown RBP10.58□□□□□ -0.72
CLDND1-231ENST00000515620 MYLK3Q32MK0 819 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 C16orf46Q6P387 395 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 FOXR2Q6PJQ5 311 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 OLFML1Q6UWY5 402 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 C11orf57Q6ZUT1 292 aaPredicted RBP10.58□□□□□ -0.72
CLDND1-231ENST00000515620 IRF2BP1Q8IU81 584 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 PASD1Q8IV76 773 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 PLPP6Q8IY26 295 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 NRSN1Q8IZ57 195 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 EFCAB3Q8N7B9 438 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 GALNT11Q8NCW6 608 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 STARD8Q92502 1023 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 ARHGEF2Q92974 986 aaKnown RBP10.58□□□□□ -0.72
CLDND1-231ENST00000515620 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
CLDND1-231ENST00000515620 ASPSCR1Q9BZE9 553 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 TMEM168Q9H0V1 697 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 PRDM8Q9NQV8 689 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 ZNF212Q9UDV6 495 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 RCOR1Q9UKL0 485 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 CNTN6Q9UQ52 1028 aa10.58□□□□□ -0.72
CLDND1-231ENST00000515620 C2CD3Q4AC94 2353 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 TRIM49BA6NDI0 452 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 TMEM202A6NGA9 273 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 POP4O95707 220 aaKnown RBP10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ERBB2P04626 1255 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ZSCAN22P10073 491 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-231ENST00000515620 TIMP2P16035 220 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 XPAP23025 273 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-231ENST00000515620 MPSTP25325 297 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 TNFRSF8P28908 595 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 CD1CP29017 333 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 CSTF2P33240 577 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLDND1-231ENST00000515620 DCTP40126 519 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 PRCPP42785 496 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 LIMK2P53671 638 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 RIPPLY3P57055 190 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 CETN1Q12798 172 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 TRA2AQ13595 282 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ARTNQ5T4W7 220 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 DCAF12Q5T6F0 453 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 NKAIN2Q5VXU1 208 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ANKS6Q68DC2 871 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ANKRD40Q6AI12 368 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ASB18Q6ZVZ8 466 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 SLC26A9Q7LBE3 791 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ZNF438Q7Z4V0 828 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 NLGN4XQ8N0W4 816 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 NLGN4YQ8NFZ3 816 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-231ENST00000515620 OR56A4Q8NGH8 313 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 CCL4L1Q8NHW4 92 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 KIAA1524Q8TCG1 905 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 NPY6RQ99463 290 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ZYG11BQ9C0D3 744 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 OCIAD1Q9NX40 245 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 PILRAQ9UKJ1 303 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 CFAP45Q9UL16 551 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 CACNA1DQ01668 2161 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 CHD5Q8TDI0 1954 aa10.57□□□□□ -0.72
CLDND1-231ENST00000515620 RP1L1Q8IWN7 2480 aaPredicted RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 TTLL8A6PVC2 850 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 MKRN2OSH3BPM6 223 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 CACNB4O00305 520 aaPredicted RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 PMM2O15305 246 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 THRAP10827 490 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 TCN2P20062 427 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 POU3F2P20265 443 aaPredicted RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 MAP4P27816 1152 aaKnown RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 CSF2RBP32927 897 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 COPB1P53618 953 aaKnown RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 GEMIN4P57678 1058 aaKnown RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 RAB15P59190 212 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 RNASE9P60153 205 aaKnown RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 DEUP1Q05D60 604 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 BIRC2Q13490 618 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 MTM1Q13496 603 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 CLPPQ16740 277 aaPredicted RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 CCDC40Q4G0X9 1142 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 TMEM52BQ4KMG9 183 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 ATL3Q6DD88 541 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 TCTN3Q6NUS6 607 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 KRBA2Q6ZNG9 492 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 KDELC2Q7Z4H8 507 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 WDTC1Q8N5D0 677 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 PLA2G15Q8NCC3 412 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 C1orf131Q8NDD1 294 aaKnown RBP10.56□□□□□ -0.72
CLDND1-231ENST00000515620 OR4D9Q8NGE8 314 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 C1orf74Q96LT6 269 aa10.56□□□□□ -0.72
CLDND1-231ENST00000515620 GDAP1L1Q96MZ0 367 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms