RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 RBM15Q96T37 977 aaKnown RBP eCLIP15.89■□□□□ 0.13
LMNA-223ENST00000515459 NCAPGQ9BPX3 1015 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 MAGEB5Q9BZ81 275 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 OR1A2Q9Y585 309 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 AGRPO00253 132 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 MMEP08473 750 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 CD82P27701 267 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 SRSF1Q07955 248 aaKnown RBP eCLIP15.88■□□□□ 0.13
LMNA-223ENST00000515459 AGERQ15109 404 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 TBR1Q16650 682 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 UGP2Q16851 508 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 CERCAMQ5T4B2 595 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 NAA35Q5VZE5 725 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 DPY19L2P1Q6NXN4 242 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 NYAP1Q6ZVC0 841 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 STRADAQ7RTN6 431 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 ZFAND4Q86XD8 727 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 CCDC185Q8N715 623 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 NETO2Q8NC67 525 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 USP7Q93009 1102 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 HMCESQ96FZ2 354 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 PDXPQ96GD0 296 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 NDST4Q9H3R1 872 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 KIAA1468Q9P260 1216 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 FHOD1Q9Y613 1164 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 DGKBQ9Y6T7 804 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 RNF215Q9Y6U7 377 aa15.88■□□□□ 0.13
LMNA-223ENST00000515459 A0A1W2PQC6 194 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 INSIG1O15503 277 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 PPFIA2O75334 1257 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 PIGNO95427 931 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 PCCBP05166 539 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
LMNA-223ENST00000515459 ETV5P41161 510 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 PTPN9P43378 593 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 MAPK10P53779 464 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 MTM1Q13496 603 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 ARHGEF7Q14155 803 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 GRM3Q14832 879 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 VWA3BQ502W6 1294 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 KLHDC7AQ5VTJ3 777 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 ERAP2Q6P179 960 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 OGFOD3Q6PK18 319 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 ZNF574Q6ZN55 896 aaPredicted RBP15.87■□□□□ 0.13
LMNA-223ENST00000515459 SPRED1Q7Z699 444 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 TAF8Q7Z7C8 310 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 DTX1Q86Y01 620 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 FAM114A1Q8IWE2 563 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 FAM46DQ8NEK8 389 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 GPT2Q8TD30 523 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 EPS8L1Q8TE68 723 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 EXOC2Q96KP1 924 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 NOL6Q9H6R4 1146 aaKnown RBP15.87■□□□□ 0.13
LMNA-223ENST00000515459 PCDH12Q9NPG4 1184 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 FOXJ2Q9P0K8 574 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 LRIT1Q9P2V4 623 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 DAAM1Q9Y4D1 1078 aa15.87■□□□□ 0.13
LMNA-223ENST00000515459 UBR5O95071 2799 aaPredicted RBP15.87■□□□□ 0.13
LMNA-223ENST00000515459 TSPAN11A1L157 253 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 C2CD4BA6NLJ0 364 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
LMNA-223ENST00000515459 LIG3P49916 1009 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 HDAC4P56524 1084 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 YBEYP58557 167 aaPredicted RBP15.86■□□□□ 0.13
LMNA-223ENST00000515459 CYP4F2P78329 520 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 C14orf28Q4W4Y0 310 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 MIIPQ5JXC2 388 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 COLEC12Q5KU26 742 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 CFAP58Q5T655 872 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 PHF19Q5T6S3 580 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 TMEM164Q5U3C3 297 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 KCTD16Q68DU8 428 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 DNAAF5Q86Y56 855 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 SLITRK4Q8IW52 837 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 RTL3Q8N8U3 475 aaKnown RBP15.86■□□□□ 0.13
LMNA-223ENST00000515459 OR56A4Q8NGH8 313 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 JOSD2Q8TAC2 188 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 CENPIQ92674 756 aaPredicted RBP15.86■□□□□ 0.13
LMNA-223ENST00000515459 NTAN1Q96AB6 310 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 NAA15Q9BXJ9 866 aaKnown RBP15.86■□□□□ 0.13
LMNA-223ENST00000515459 B3GNT4Q9C0J1 378 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 KLC2Q9H0B6 622 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 SUV39H2Q9H5I1 410 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 LHX3Q9UBR4 397 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 BOD1L1Q8NFC6 3051 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 PTPN13Q12923 2485 aa15.86■□□□□ 0.13
LMNA-223ENST00000515459 B4DGG1 531 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 C9orf172C9J069 976 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.85■□□□□ 0.13
LMNA-223ENST00000515459 CACNB4O00305 520 aaPredicted RBP15.85■□□□□ 0.13
LMNA-223ENST00000515459 NUDT21O43809 227 aaKnown RBP15.85■□□□□ 0.13
LMNA-223ENST00000515459 UCHL3P15374 230 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 WT1P19544 449 aaPredicted RBP15.85■□□□□ 0.13
LMNA-223ENST00000515459 MMP8P22894 467 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 KELP23276 732 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 EPHB2P29323 1055 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 MMP12P39900 470 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 KIAA1024LP59773 190 aa15.85■□□□□ 0.13
LMNA-223ENST00000515459 HLTFQ14527 1009 aaKnown RBP eCLIP15.85■□□□□ 0.13
LMNA-223ENST00000515459 PARP15Q460N3 678 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms