RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SH3RF2Q8TEC5 729 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 DDI1Q8WTU0 396 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 ISG20Q96AZ6 181 aaKnown RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 NSMCE3Q96MG7 304 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 SIKE1Q9BRV8 207 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 TSSK1BQ9BXA7 367 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 C1QTNF1Q9BXJ1 281 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 ADGRE3Q9BY15 652 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 C12orf65Q9H3J6 166 aaKnown RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 ACTR5Q9H9F9 607 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 SLCO1B3Q9NPD5 702 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 TDP1Q9NUW8 608 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 NLE1Q9NVX2 485 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.42□□□□□ -1.06
RNF4-220ENST00000513578 IL1RAPL1Q9NZN1 696 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 MARK1Q9P0L2 795 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 TMEM216Q9P0N5 145 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 GGT7Q9UJ14 662 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 VPS28Q9UK41 221 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 PRDM4Q9UKN5 801 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 RRP15Q9Y3B9 282 aaKnown RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 C2orf16Q68DN1 1984 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 A0A087X1B8 175 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 FAM95CA0A1B0GW59 222 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 TTC24A2A3L6 582 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 ANKRD66B4E2M5 251 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 H7C0S8 307 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 NRG2O14511 850 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 SLC9A3R1O14745 358 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 SNAP91O60641 907 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 SOCS5O75159 536 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 H2AFYO75367 372 aaKnown RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 WISP3O95389 354 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 S1PR4O95977 384 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 EPCAMP16422 314 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 STMN1P16949 149 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 BGNP21810 368 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 CD9P21926 228 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 ALDH3A1P30838 453 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 IRS1P35568 1242 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 AVPR1AP37288 418 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 GRIA4P48058 902 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 SCNN1BP51168 640 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 ZNF140P52738 457 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 RAB10P61026 200 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 RHOAP61586 193 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 OCRLQ01968 901 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 LMAN2Q12907 356 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 SEPT6Q14141 434 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 USP10Q14694 798 aaKnown RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 TEAD2Q15562 447 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 ZNF77Q15935 545 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 TYSND1Q2T9J0 566 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 TSNAXIP1Q2TAA8 658 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 PLEKHG6Q3KR16 790 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 GALNTL6Q49A17 601 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 TAF1BQ53T94 588 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 MBLAC2Q68D91 279 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 ZNF470Q6ECI4 717 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 MRNIPQ6NTE8 343 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 FAM47EQ6ZV65 393 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 CMC1Q7Z7K0 106 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 DENND6AQ8IWF6 608 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 PLPP6Q8IY26 295 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 OTUD6BQ8N6M0 293 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.41□□□□□ -1.06
RNF4-220ENST00000513578 WFDC5Q8TCV5 224 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 MICAL1Q8TDZ2 1067 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 C10orf82Q8WW14 230 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 ZNF707Q96C28 371 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 TSPAN17Q96FV3 270 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 CDKN2AIPNLQ96HQ2 116 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 TCF12Q99081 682 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 TRIM55Q9BYV6 548 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 SLC2A11Q9BYW1 496 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 CEP44Q9C0F1 390 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 POPDC3Q9HBV1 291 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 MAGEE1Q9HCI5 957 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 INTS10Q9NVR2 710 aaKnown RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 THAP1Q9NVV9 213 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 COPG2Q9UBF2 871 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 TLK1Q9UKI8 766 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 HS3ST2Q9Y278 367 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 ACOT9Q9Y305 439 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 RAI2Q9Y5P3 530 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 ACTL7AQ9Y615 435 aa8.41□□□□□ -1.06
RNF4-220ENST00000513578 RANBP2P49792 3224 aaKnown RBP8.41□□□□□ -1.06
RNF4-220ENST00000513578 A0A1W2PQ67 120 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 WDR91A4D1P6 747 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 C2orf81A6NN90 581 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TARM1B6A8C7 271 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 HTRA2O43464 458 aaPredicted RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 RFPL2O75678 378 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 GJB3O75712 270 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 DCTN3O75935 186 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 HAUS5O94927 633 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 ARHGEF15O94989 841 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms