RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ADAM21Q9UKJ8 722 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ADAMTS5Q9UNA0 930 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 LIPT1Q9Y234 373 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CORINQ9Y5Q5 1042 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 COL11A1P12107 1806 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR6C76A6NM76 312 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZBTB5O15062 677 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 NR3C2P08235 984 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCDC130P13994 396 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 NME1P15531 152 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRKACAP17612 351 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GRK5P34947 590 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ACADSBP45954 432 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 FMO1Q01740 532 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GCNT1Q02742 428 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 BAATQ14032 418 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 RAB30Q15771 203 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRSS53Q2L4Q9 553 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GPAT3Q53EU6 434 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 RTP2Q5QGT7 225 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRAMEF19Q5SWL8 479 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GALNT18Q6P9A2 607 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 FOXR2Q6PJQ5 311 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 AFTPHQ6ULP2 937 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZC3H7AQ8IWR0 971 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GALNT4Q8N4A0 578 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 MAB21L3Q8N8X9 362 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 FAM181AQ8N9Y4 354 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CHST14Q8NCH0 376 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 BBS1Q8NFJ9 593 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CFAP61Q8NHU2 1237 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 METTL6Q8TCB7 284 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TSPAN17Q96FV3 270 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 HAUS8Q9BT25 410 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZSCAN5AQ9BUG6 496 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 COLEC11Q9BWP8 271 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 AMNQ9BXJ7 453 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GON7Q9BXV9 100 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GPR62Q9BZJ7 368 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PCDH18Q9HCL0 1135 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TUFT1Q9NNX1 390 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 FLRT1Q9NZU1 646 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CNIH4Q9P003 139 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 LARSQ9P2J5 1176 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 B4GALT6Q9UBX8 382 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 REV1Q9UBZ9 1251 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC22A14Q9Y267 594 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PCDHB6Q9Y5E3 794 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PCDHB2Q9Y5E7 798 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 RLFQ13129 1914 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 C1orf232A0A0U1RR37 186 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GOLGA8OA6NCC3 632 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 SPDYE3A6NKU9 549 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 METTL12A8MUP2 240 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GOLGA8NF8WBI6 632 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRPF4O43172 522 aaKnown RBP eCLIP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 JAK2O60674 1132 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CBR3O75828 277 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC25A27O95847 323 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TGFAP01135 160 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 IGHEP01854 428 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 OPN1LWP04000 364 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 MYZAPP0CAP1 466 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRPS2P11908 318 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 KRT3P12035 628 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 SELLP14151 372 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 IDO1P14902 403 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 EIF2AK2P19525 551 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 HNRNPA2B1P22626 353 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PTGS1P23219 599 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GRK4P32298 578 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CASP3P42574 277 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 NAPAP54920 295 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 RPS6P62753 249 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PTPN11Q06124 597 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 MTFR1Q15390 333 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 NFIL3Q16649 462 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 UBE2SQ16763 222 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC9B1Q4ZJI4 515 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TTC23LQ6PF05 361 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 USP17L6PQ6QN14 398 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CYP20A1Q6UW02 462 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 RNF207Q6ZRF8 634 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRR23CQ6ZRP0 262 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 USP53Q70EK8 1073 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CUZD1Q86UP6 607 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 SPATA4Q8NEY3 305 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TRIB2Q92519 343 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 NEIL1Q96FI4 390 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 LRRC46Q96FV0 321 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 APOPT1Q96IL0 206 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PIWIL1Q96J94 861 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PGBD1Q96JS3 809 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM68Q96MH6 324 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 HS3ST6Q96QI5 342 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 NR1H4Q96RI1 486 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZFYVE21Q9BQ24 234 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms