RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 PROX2Q3B8N5 592 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 CCDC157Q569K6 752 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 VPS36Q86VN1 386 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 ZSWIM9Q86XI8 627 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 TXLNBQ8N3L3 684 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 GALNT15Q8N3T1 639 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 SLC25A45Q8N413 288 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 FAM174AQ8TBP5 190 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 HNRNPLLQ8WVV9 542 aaKnown RBP10.4□□□□□ -0.74
PFDN1-203ENST00000510217 ASB12Q8WXK4 309 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 BTBD6Q96KE9 485 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 NUP85Q9BW27 656 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.4□□□□□ -0.741e-6■■□□□ 13.8
PFDN1-203ENST00000510217 KLHL11Q9NVR0 708 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 ANAPC7Q9UJX3 599 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 REXO2Q9Y3B8 237 aaKnown RBP10.4□□□□□ -0.74
PFDN1-203ENST00000510217 PCDHGA1Q9Y5H4 931 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 HS3ST3A1Q9Y663 406 aa10.4□□□□□ -0.74
PFDN1-203ENST00000510217 IGF2RP11717 2491 aa10.4□□□□□ -0.75
PFDN1-203ENST00000510217 ARID1BQ8NFD5 2236 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 COL27A1Q8IZC6 1860 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 SPTY2D1-AS1A0A0U1RR47 76 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 FAM149AA5PLN7 773 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 SRRM3A6NNA2 597 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 TAF4O00268 1085 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 FPGTO14772 594 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 MUSKO15146 869 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 BUB1BO60566 1050 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 MMP20O60882 483 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 ERLIN1O75477 346 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 CYP1A2P05177 515 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 TIMP2P16035 220 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 MMP12P39900 470 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 MLLT3P42568 568 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 RABIFP47224 123 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 HCAR3P49019 387 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 CKAP4Q07065 602 aaKnown RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 IL10RBQ08334 325 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 SGCGQ13326 291 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 PDE1CQ14123 709 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 PIGHQ14442 188 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 POLNQ7Z5Q5 900 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 TTC7BQ86TV6 843 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 PARGQ86W56 976 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 TP53I13Q8NBR0 393 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 TSEN2Q8NCE0 465 aaKnown RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 OR4C6Q8NH72 309 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 CXorf40AQ8TE69 158 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 HSPH1Q92598 858 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 CENPTQ96BT3 561 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 IFT43Q96FT9 208 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 CSPG4P5Q96PW8 444 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 TUBGCP5Q96RT8 1024 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 WRAP53Q9BUR4 548 aaKnown RBP10.39□□□□□ -0.75
PFDN1-203ENST00000510217 ZWILCHQ9H900 591 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 SP110Q9HB58 689 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 ARFGAP3Q9NP61 516 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 ETNK2Q9NVF9 386 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 DNAJC28Q9NX36 388 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 KLF15Q9UIH9 416 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 RAB21Q9UL25 225 aa10.39□□□□□ -0.75
PFDN1-203ENST00000510217 TDRD6O60522 2096 aaKnown RBP10.38□□□□□ -0.75
PFDN1-203ENST00000510217 SHROOM3Q8TF72 1996 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 LY6G6EA0A0G2JKS1 128 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CTAGE15A4D2H0 777 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 H3BRJ5 948 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 FFAR2O15552 330 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 ZZEF1O43149 2961 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 SIGLEC6O43699 453 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 PALMO75781 387 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 PEX11BO96011 259 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CSF2P04141 144 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 C1SP09871 688 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CTAGE8P0CG41 777 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 RARAP10276 462 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 NME1P15531 152 aaKnown RBP10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CKMT2P17540 419 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 ACP1P24666 158 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 MCM3P25205 808 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CSNK1DP48730 415 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 VAV2P52735 878 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 ELP6Q0PNE2 266 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 EIF2B5Q13144 721 aaKnown RBP10.38□□□□□ -0.75
PFDN1-203ENST00000510217 ZNF211Q13398 564 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-203ENST00000510217 RFTN1Q14699 578 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-203ENST00000510217 GRM3Q14832 879 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 IRF4Q15306 451 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 UGP2Q16851 508 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 TMEM52BQ4KMG9 183 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 ZNF542PQ5EBM4 170 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 ALKBH5Q6P6C2 394 aaKnown RBP10.38□□□□□ -0.75
PFDN1-203ENST00000510217 BRAT1Q6PJG6 821 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 KIAA1328Q86T90 577 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CTAGE6Q86UF2 777 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 PROSER1Q86XN7 944 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CPNE8Q86YQ8 564 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 DCP2Q8IU60 420 aaKnown RBP10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CAMK1DQ8IU85 385 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 CTAGE4Q8IX94 777 aa10.38□□□□□ -0.75
PFDN1-203ENST00000510217 ZNF548Q8NEK5 533 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms