RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	FAM118B	Q9BPY3	351 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TREX2	Q9BQ50	279 aa	Predicted RBP	3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	QTRT1	Q9BXR0	403 aa	Known RBP	3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	NUF2	Q9BZD4	464 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PAPOLB	Q9NRJ5	636 aa	Known RBP	3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SEPT11	Q9NVA2	429 aa	Known RBP	3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	HAUS2	Q9NVX0	235 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMEM45A	Q9NWC5	275 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	KCNE2	Q9Y6J6	123 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DDX49	Q9Y6V7	483 aa	Known RBP	3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ABCC4	O15439	1325 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ATP10D	Q9P241	1426 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CDK12	Q9NYV4	1490 aa	Predicted RBP	3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ARHGEF40	Q8TER5	1519 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PREX1	Q8TCU6	1659 aa		3.32	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RIMBP3C	A6NJZ7	1639 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RIMBP3B	A6NNM3	1639 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RIMBP3	Q9UFD9	1639 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PTPRM	P28827	1452 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CPSF1	Q10570	1443 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784		A0A1W2PP64	1363 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PNPLA6	Q8IY17	1366 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TRBV5-7	A0A0A0MS05	114 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	KIR2DS5	A0A0G2JLQ3	304 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SMIM35	A0A1B0GVV1	85 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784		F8W810	466 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784		K7ENM7	598 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	KIR2DS3	K7RE56	304 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	IFNL4	K9M1U5	179 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PPP6C	O00743	305 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TP73	O15350	636 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SEC14L2	O76054	403 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SEC31A	O94979	1220 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CCNDBP1	O95273	360 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LATS1	O95835	1130 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MBD3	O95983	291 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ACADM	P11310	421 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LAMP2	P13473	410 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ATP5F1	P24539	256 aa	Predicted RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PSMA4	P25789	261 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	BSG	P35613	385 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SLC16A2	P36021	539 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PBX3	P40426	434 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MLH1	P40692	756 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMPO	P42166	694 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RPS13	P62277	151 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	YWHAZ	P63104	245 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DMTN	Q08495	405 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PPP2R5B	Q15173	497 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TTC39A	Q5SRH9	613 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CDC73	Q6P1J9	531 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ZNF793	Q6ZN11	406 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CCDC129	Q6ZRS4	1044 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	IKBIP	Q70UQ0	350 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PTF1A	Q7RTS3	328 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LURAP1L	Q8IV03	231 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SLC25A41	Q8N5S1	370 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LRRC57	Q8N9N7	239 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ZMIZ2	Q8NF64	920 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	GPT2	Q8TD30	523 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DDB2	Q92466	427 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	NELL1	Q92832	810 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	INTS12	Q96CB8	462 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SIGLEC11	Q96RL6	698 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PLEKHF1	Q96S99	279 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TUBB6	Q9BUF5	446 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CCDC94	Q9BW85	323 aa	Predicted RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FTO	Q9C0B1	505 aa	Known RBP eCLIP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	GHITM	Q9H3K2	345 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CHMP4B	Q9H444	224 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ADARB2	Q9NS39	739 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMEM184C	Q9NVA4	438 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LIMA1	Q9UHB6	759 aa	Known RBP	3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MKLN1	Q9UL63	735 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	GPR34	Q9UPC5	381 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SLC45A1	Q9Y2W3	748 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RAP2C	Q9Y3L5	183 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CAPN7	Q9Y6W3	813 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DLG5	Q8TDM6	1919 aa		3.31	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SETD1A	O15047	1707 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MON2	Q7Z3U7	1717 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CRYBG1	Q9Y4K1	1723 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FAM208A	Q9UK61	1670 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DLC1	Q96QB1	1528 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ATP7B	P35670	1465 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RGS12	O14924	1447 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	NPAT	Q14207	1427 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TRBV5-3	A0A0A0MS03	114 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FAM237B	A0A1B0GVD1	139 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TYW5	A2RUC4	315 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	WIPF3	A6NGB9	483 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LRRC53	A6NM62	1247 aa		3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	EIF3CL	B5ME19	914 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	GTPBP1	O00178	669 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	IPO8	O15397	1037 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RNMT	O43148	476 aa	Known RBP	3.3	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PRPF4	O43172	522 aa	Known RBP eCLIP	3.3	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms