RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 RHBDF2Q6PJF5 856 aa5.39□□□□□ -1.55
TOPBP1-206ENST00000508524 BBS12Q6ZW61 710 aa5.39□□□□□ -1.55
TOPBP1-206ENST00000508524 NEK10Q6ZWH5 1172 aa5.39□□□□□ -1.55
TOPBP1-206ENST00000508524 TXLNGQ9NUQ3 528 aa5.39□□□□□ -1.55
TOPBP1-206ENST00000508524 PAM16Q9Y3D7 125 aa5.39□□□□□ -1.55
TOPBP1-206ENST00000508524 NFS1Q9Y697 457 aa5.39□□□□□ -1.55
TOPBP1-206ENST00000508524 PTPRMP28827 1452 aa5.39□□□□□ -1.55
TOPBP1-206ENST00000508524 RUSC2Q8N2Y8 1516 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 GLI2P10070 1586 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 KIF21BO75037 1637 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 TOP2BQ02880 1626 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 WNT9BO14905 357 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 RGS11O94810 467 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 ZNF8P17098 575 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 PTPN2P17706 415 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 ITGAXP20702 1163 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 PIGAP37287 484 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 SOWAHAQ2M3V2 549 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 ZNF667Q5HYK9 610 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 SHFQ7M4L6 423 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 TBC1D26Q86UD7 250 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 RFLNBQ8N5W9 214 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 SNAPC3Q92966 411 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 EYA3Q99504 573 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 A3GALT2U3KPV4 340 aa5.38□□□□□ -1.55
TOPBP1-206ENST00000508524 TYW5A2RUC4 315 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 HSPA12AO43301 675 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 IGKV3-20P01619 116 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 PEX5P50542 639 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 CCR5P51681 352 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 CLDN2P57739 230 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 YWHAZP63104 245 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 CES5AQ6NT32 575 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 ADGRG6Q86SQ4 1221 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 FAM160B2Q86V87 743 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 CPOQ8IVL8 374 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 PARP16Q8N5Y8 322 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 GJC3Q8NFK1 279 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 RUFY2Q8WXA3 655 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 HERVK_113Q902F9 699 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 ERGIC1Q969X5 290 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 ELP4Q96EB1 424 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 BICD1Q96G01 975 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 HERPUD2Q9BSE4 406 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 MALT1Q9UDY8 824 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 FHAD1B1AJZ9 1412 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 ABCC2Q92887 1545 aa5.37□□□□□ -1.55
TOPBP1-206ENST00000508524 BUB3O43684 328 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 KLK8O60259 260 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 CAMTA2O94983 1202 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 EDN2P20800 178 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 NR1H2P55055 460 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 HDAC4P56524 1084 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 POU3F1Q03052 451 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 PPFIA1Q13136 1202 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 RUNX2Q13950 521 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 ARHGEF6Q15052 776 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 ZRSR1Q15695 479 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 ATG16L1Q676U5 607 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 OTULINQ96BN8 352 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 IL17FQ96PD4 163 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 MMTAG2Q9BU76 263 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 MAP3K4Q9Y6R4 1608 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 ADAMTSL3P82987 1691 aa5.36□□□□□ -1.55
TOPBP1-206ENST00000508524 EPRSP07814 1512 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 SAA2-SAA4A0A096LPE2 208 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 hDV102S1A0JD36 115 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 MAGEA13PA6NCF6 341 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 IFRD1O00458 451 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 KRT36O76013 467 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 GAGE7O76087 117 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 GAGE12FP0CL80 117 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 GAGE12GP0CL81 117 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 GAGE12IP0CL82 117 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 SLC2A4P14672 509 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 BRWD1-AS2P59051 145 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 UBE3AQ05086 875 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 GAGE1Q13065 139 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 GAGE4Q13068 117 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 EFNB3Q15768 340 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 CALCRLQ16602 461 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 ZNF329Q86UD4 541 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 ZSCAN31Q96LW9 406 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 RIC8AQ9NPQ8 531 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 SNTG1Q9NSN8 517 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 PEMTQ9UBM1 199 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 SLC9A2Q9UBY0 812 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 SLCO3A1Q9UIG8 710 aa5.35□□□□□ -1.55
TOPBP1-206ENST00000508524 TULP2O00295 520 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 ZIC3O60481 467 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 PMS2P2O95744 297 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 PCNAP12004 261 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 CHRNDQ07001 517 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 ZNF771Q7L3S4 317 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 ZC3HC1Q86WB0 502 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 KIAA2013Q8IYS2 634 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 PLD5Q8N7P1 536 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 SPATA20Q8TB22 786 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 ZC3HAV1LQ96H79 300 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms