RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 GCATO75600 419 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 PEX11BO96011 259 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CYP1A2P05177 515 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 SERPINA4P29622 427 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 LIG3P49916 1009 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 SCNN1BP51168 640 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 C1orf61Q13536 156 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 LBRQ14739 615 aaKnown RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 BOLA3Q53S33 107 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 TMCO3Q6UWJ1 677 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 PHACTR4Q8IZ21 702 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 NIPA2Q8N8Q9 360 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 FAM181AQ8N9Y4 354 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 RFFLQ8WZ73 363 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 ECHDC3Q96DC8 303 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 PCDH18Q9HCL0 1135 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 APOBEC3BQ9UH17 382 aaKnown RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 IP6K2Q9UHH9 426 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 NENFQ9UMX5 172 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CLCA2Q9UQC9 943 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CELA2BP08218 269 aaPredicted RBP14.38□□□□□ -0.11
RAB28-205ENST00000508274 CD48P09326 243 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 SUOXP51687 545 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 BCL2L1Q07817 233 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 RALGDSQ12967 914 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 MMRN1Q13201 1228 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 RFTN1Q14699 578 aaPredicted RBP14.38□□□□□ -0.11
RAB28-205ENST00000508274 LRRC14Q15048 493 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 TCEA2Q15560 299 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 CDKN3Q16667 212 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 PRRT3Q5FWE3 981 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 CCDC122Q5T0U0 273 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 TMCO4Q5TGY1 634 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 ERAP2Q6P179 960 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 MACC1Q6ZN28 852 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 PGBD5Q8N414 524 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 LZTR1Q8N653 840 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 TEKT4Q8WW24 435 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 NXPE2Q96DL1 559 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 PSKH2Q96QS6 385 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 LRRC61Q9BV99 259 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 DUSP23Q9BVJ7 150 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 SEPT3Q9UH03 358 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 LHX6Q9UPM6 363 aa14.38□□□□□ -0.11
RAB28-205ENST00000508274 A8MX80 341 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 TRAFD1O14545 582 aaPredicted RBP14.37□□□□□ -0.11
RAB28-205ENST00000508274 MAFKO60675 156 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 PCCBP05166 539 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 MAXP61244 160 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 YPEL5P62699 121 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
RAB28-205ENST00000508274 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 ZCCHC8Q6NZY4 707 aaKnown RBP14.37□□□□□ -0.11
RAB28-205ENST00000508274 GUSBP11Q6P575 273 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 DCBLD1Q8N8Z6 715 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 PLA2G15Q8NCC3 412 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
RAB28-205ENST00000508274 IFI44Q8TCB0 444 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 IQCDQ96DY2 449 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 PACSIN1Q9BY11 444 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 CLPBQ9H078 707 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 SPASTQ9UBP0 616 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 OR1A2Q9Y585 309 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 CSNK1G3Q9Y6M4 447 aa14.37□□□□□ -0.11
RAB28-205ENST00000508274 BPTFQ12830 3046 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 MYO1FO00160 1098 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 CASC3O15234 703 aaKnown RBP14.36□□□□□ -0.11
RAB28-205ENST00000508274 LZTS3O60299 673 aaPredicted RBP14.36□□□□□ -0.11
RAB28-205ENST00000508274 MT-CO3P00414 261 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 GM2AP17900 193 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 CR2P20023 1033 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 IL4RP24394 825 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 GJC1P36383 396 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 SSR1P43307 286 aaKnown RBP14.36□□□□□ -0.11
RAB28-205ENST00000508274 ADKP55263 362 aaKnown RBP14.36□□□□□ -0.11
RAB28-205ENST00000508274 CDH6P55285 790 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 KRT81Q14533 505 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 ZNF235Q14590 738 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 INPP5AQ14642 412 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 COL28A1Q2UY09 1125 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 FAXCQ5TGI0 409 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 ATPAF2Q8N5M1 289 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 PAF1Q8N7H5 531 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 BTN2A2Q8WVV5 523 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 HNRNPLLQ8WVV9 542 aaKnown RBP14.36□□□□□ -0.11
RAB28-205ENST00000508274 TSACCQ96A04 125 aaPredicted RBP14.36□□□□□ -0.11
RAB28-205ENST00000508274 IL12RB2Q99665 862 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 PCDHB1Q9Y5F3 818 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 PCDHGC4Q9Y5F7 938 aa14.36□□□□□ -0.11
RAB28-205ENST00000508274 CPED1A4D0V7 1026 aa14.35□□□□□ -0.11
RAB28-205ENST00000508274 MFSD11O43934 449 aa14.35□□□□□ -0.11
RAB28-205ENST00000508274 OPA1O60313 960 aa14.35□□□□□ -0.11
RAB28-205ENST00000508274 RECQL5O94762 991 aaPredicted RBP14.35□□□□□ -0.11
RAB28-205ENST00000508274 TSHRP16473 764 aa14.35□□□□□ -0.11
RAB28-205ENST00000508274 AP1S1P61966 158 aa14.35□□□□□ -0.11
RAB28-205ENST00000508274 E2F1Q01094 437 aa14.35□□□□□ -0.11
RAB28-205ENST00000508274 PPARDQ03181 441 aa14.35□□□□□ -0.11
RAB28-205ENST00000508274 NFATC4Q14934 902 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms